RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CITED2Q99967 270 aaPredicted RBP7.82□□□□□ -1.16
TPM3-210ENST00000368530 NPFFR1Q9GZQ6 430 aa7.82□□□□□ -1.16
TPM3-210ENST00000368530 A6NDX4 124 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 KRBOX1C9JBD0 128 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 HMGB3O15347 200 aaKnown RBP7.81□□□□□ -1.16
TPM3-210ENST00000368530 IGHV3-48P01763 117 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 MAS1LP35410 378 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 SUB1P53999 127 aaKnown RBP eCLIP7.81□□□□□ -1.16
TPM3-210ENST00000368530 FGF8P55075 233 aaPredicted RBP7.81□□□□□ -1.16
TPM3-210ENST00000368530 SSBP2P81877 361 aaPredicted RBP7.81□□□□□ -1.16
TPM3-210ENST00000368530 ZNF726P1Q15940 193 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 GUK1Q16774 197 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 MIC13Q5XKP0 118 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 CENPVQ7Z7K6 275 aaPredicted RBP7.81□□□□□ -1.16
TPM3-210ENST00000368530 NDUFA11Q86Y39 141 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 OR10G4Q8NGN3 311 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 MALSU1Q96EH3 234 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 EIF5A2Q9GZV4 153 aaKnown RBP7.81□□□□□ -1.16
TPM3-210ENST00000368530 SLC25A22Q9H936 323 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 NPVFQ9HCQ7 196 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 TENM3Q9P273 2699 aa7.81□□□□□ -1.16
TPM3-210ENST00000368530 TMEM218A2RU14 115 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 TEX22C9J3V5 150 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 C9JQL5 133 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 INS-IGF2F8WCM5 200 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 SCO1O75880 301 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 DEFA4P12838 97 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 OPRK1P41145 380 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 ATP5IP56385 69 aaPredicted RBP7.8□□□□□ -1.16
TPM3-210ENST00000368530 CD69Q07108 199 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 HAGHQ16775 308 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 GCSAMLQ5JQS6 135 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 TEPPQ6URK8 271 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 SLC16A13Q7RTY0 426 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 MRPL41Q8IXM3 137 aaKnown RBP7.8□□□□□ -1.16
TPM3-210ENST00000368530 NPBQ8NG41 125 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 SRSF12Q8WXF0 261 aaKnown RBP7.8□□□□□ -1.16
TPM3-210ENST00000368530 ACY3Q96HD9 319 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 FAM103A1Q9BTL3 118 aaKnown RBP7.8□□□□□ -1.16
TPM3-210ENST00000368530 GGTLC1Q9BX51 225 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 PXMP4Q9Y6I8 212 aa7.8□□□□□ -1.16
TPM3-210ENST00000368530 IGHV3-21A0A0B4J1V1 117 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 K7EIL1 84 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 MPDU1O75352 247 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 NDUFA3O95167 84 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 HBE1P02100 147 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 MBP02144 154 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 APOC3P02656 99 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 BRS3P32247 399 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 MFAP2P55001 183 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 BLCAPP62952 87 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 GAMTQ14353 236 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 FXYD3Q14802 87 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 C5orf64Q2M2E5 130 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 ACOT6Q3I5F7 207 aaPredicted RBP7.79□□□□□ -1.16
TPM3-210ENST00000368530 RPP25LQ8N5L8 163 aaKnown RBP7.79□□□□□ -1.16
TPM3-210ENST00000368530 COMMD1Q8N668 190 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 Q8N6K4 173 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 LFNGQ8NES3 379 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 SLC35E1Q96K37 410 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 RARRES2Q99969 163 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
TPM3-210ENST00000368530 F8W036 122 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 YIF1AO95070 293 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 CD5P06127 495 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 SFTA3P0C7M3 94 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 IGLL1P15814 213 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 ADCYAP1P18509 176 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 M6PRP20645 277 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 OR10J1P30954 320 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 PPT1P50897 306 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 DEFA5Q01523 94 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 RAB31Q13636 194 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 PEA15Q15121 130 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 TCTEX1D4Q5JR98 221 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 TMEM219Q86XT9 240 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 IQCF2Q8IXL9 164 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 OR4F17Q8NGA8 305 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 RNASEH2CQ8TDP1 164 aaKnown RBP7.78□□□□□ -1.16
TPM3-210ENST00000368530 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 OR4F4Q96R69 305 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 PBDC1Q9BVG4 233 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 SCRT1Q9BWW7 348 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 ACTR3CQ9C0K3 210 aaPredicted RBP7.78□□□□□ -1.16
TPM3-210ENST00000368530 FNDC4Q9H6D8 234 aaPredicted RBP7.78□□□□□ -1.16
TPM3-210ENST00000368530 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 GNG13Q9P2W3 67 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 LSM4Q9Y4Z0 139 aaKnown RBP7.78□□□□□ -1.16
TPM3-210ENST00000368530 CTXND1A0A1B0GTU2 59 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 RBFOX3A6NFN3 312 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 FNDC10F2Z333 226 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 GATA2P23769 480 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms