RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 ALKBH7Q9BT30 221 aaPredicted RBP8.8□□□□□ -1
PTPRK-205ENST00000368213 FAM90A9PA6NNJ1 464 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 Q8TCH9 128 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 CLDN16Q9Y5I7 305 aa8.8□□□□□ -1
PTPRK-205ENST00000368213 FBLL1A6NHQ2 334 aaKnown RBP8.79□□□□□ -1
PTPRK-205ENST00000368213 NDPQ00604 133 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 CFAP161Q6P656 301 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 MUC21A0A0G2JKD1 596 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 MUC21A0A140T8X8 626 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 CIRBPQ14011 172 aaKnown RBP8.79□□□□□ -1
PTPRK-205ENST00000368213 C2orf68Q2NKX9 166 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 REC114Q7Z4M0 266 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 BEND2Q8NDZ0 799 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 PRORYQ9H606 182 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 CD8AP01732 235 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 ASCL4Q6XD76 172 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 TSC2P49815 1807 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 NDUFS7O75251 213 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 MT-ND6P03923 174 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 CXCL2P19875 107 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 TCTAP57738 103 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 RPL15P61313 204 aaKnown RBP8.79□□□□□ -1
PTPRK-205ENST00000368213 TMEM42Q69YG0 159 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 COQ2Q96H96 371 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 ASCL2Q99929 193 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 C2orf88Q9BSF0 95 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 SIGLEC9Q9Y336 463 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 HEATR1Q9H583 2144 aaKnown RBP8.79□□□□□ -1
PTPRK-205ENST00000368213 A0A0A6YYD4 124 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 VAMP3Q15836 100 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 OR10D4PQ8NGN7 298 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 ZFP30Q9Y2G7 519 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 TECTAO75443 2155 aa8.79□□□□□ -1
PTPRK-205ENST00000368213 GBF1Q92538 1859 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 ROS1P08922 2347 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 J3QR89 54 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 LGALS3P17931 250 aaKnown RBP8.78□□□□□ -1
PTPRK-205ENST00000368213 UBE2E2Q96LR5 201 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 RIPPLY3P57055 190 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 FXYD7P58549 80 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 CIARTQ8N365 385 aaPredicted RBP8.78□□□□□ -1
PTPRK-205ENST00000368213 NRGNQ92686 78 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 OVOL3O00110 214 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
PTPRK-205ENST00000368213 Q6P435 159 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 ZMAT4Q9H898 229 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 HLA-DQA1P01909 254 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 ADORA2A-AS1P86434 159 aa8.78□□□□□ -1
PTPRK-205ENST00000368213 TOMM7Q9P0U1 55 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 ZNF256Q9Y2P7 627 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-205ENST00000368213 A0A1B0GWJ7 208 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 H2BFSP57053 126 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 PCNX2A6NKB5 2137 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 BDP1A6H8Y1 2624 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 NMUP48645 174 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 FER1L6-AS1Q8NA97 138 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 NUP210Q8TEM1 1887 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-205ENST00000368213 FANCMQ8IYD8 2048 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 ATP6V0E1O15342 81 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 TMEM249Q2WGJ8 235 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 MRAPQ8TCY5 172 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
PTPRK-205ENST00000368213 DAZ1Q9NQZ3 744 aaKnown RBP8.77□□□□□ -1.01
PTPRK-205ENST00000368213 SHISA9B4DS77 424 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 TRGV1A0A0A0MS02 117 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 FCN3O75636 299 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 COPS9Q8WXC6 57 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
PTPRK-205ENST00000368213 C18orf12Q96KH6 178 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 A0A087WX48 190 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 INSP01308 110 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 IGLV1-44P01699 117 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 RNASE1P07998 156 aaKnown RBP8.76□□□□□ -1.01
PTPRK-205ENST00000368213 MPZP25189 248 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 RARRES2Q99969 163 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 PARLQ9H300 379 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-205ENST00000368213 ZNF383Q8NA42 475 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 RAB37Q96AX2 223 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 IGKV1D-8A0A087WSZ0 117 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 J3QRE1 110 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 STPG2Q8N412 459 aa8.76□□□□□ -1.01
PTPRK-205ENST00000368213 F11RQ9Y624 299 aaKnown RBP8.76□□□□□ -1.01
PTPRK-205ENST00000368213 NOTCH4Q99466 2003 aa8.75□□□□□ -1.01
PTPRK-205ENST00000368213 IGHV4-30-2A0A087WSY4 118 aa8.75□□□□□ -1.01
PTPRK-205ENST00000368213 ETV2O00321 342 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-205ENST00000368213 OTX1P32242 354 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-205ENST00000368213 GNG5P63218 68 aa8.75□□□□□ -1.01
PTPRK-205ENST00000368213 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
PTPRK-205ENST00000368213 VENTXO95231 258 aa8.75□□□□□ -1.01
PTPRK-205ENST00000368213 LRTM2Q8N967 370 aa8.75□□□□□ -1.01
PTPRK-205ENST00000368213 OR11H1Q8NG94 326 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms