RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 MZT2BQ6NZ67 158 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 LINC00322Q6ZN03 302 aaPredicted RBP12.66□□□□□ -0.38
CKLF-204ENST00000362093 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
CKLF-204ENST00000362093 RNF2Q99496 336 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 SPAG8Q99932 426 aaPredicted RBP12.66□□□□□ -0.38
CKLF-204ENST00000362093 GINS3Q9BRX5 216 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 TUBA4BQ9H853 241 aa12.66□□□□□ -0.38
CKLF-204ENST00000362093 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 FAM240BA0A1B0GVZ2 78 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 OR11H12B2RN74 326 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 SCGB2A1O75556 95 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 IFNA4P05014 189 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 OR10J1P30954 320 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 GPX4P36969 197 aaPredicted RBP12.65□□□□□ -0.38
CKLF-204ENST00000362093 YPEL3P61236 119 aaPredicted RBP12.65□□□□□ -0.38
CKLF-204ENST00000362093 IFITM3Q01628 133 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 DEFB125Q8N687 156 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 OR4D5Q8NGN0 318 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 VSIRQ9H7M9 311 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 NUDT15Q9NV35 164 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 U3KQK5 164 aa12.65□□□□□ -0.38
CKLF-204ENST00000362093 WRBO00258 174 aa12.64□□□□□ -0.39
CKLF-204ENST00000362093 APOHP02749 345 aaPredicted RBP12.64□□□□□ -0.39
CKLF-204ENST00000362093 H2AFB2P0C5Z0 115 aa12.64□□□□□ -0.39
CKLF-204ENST00000362093 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
CKLF-204ENST00000362093 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
CKLF-204ENST00000362093 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 RBMY1BA6NDE4 496 aaKnown RBP12.63□□□□□ -0.39
CKLF-204ENST00000362093 RBMY1EA6NEQ0 496 aaKnown RBP12.63□□□□□ -0.39
CKLF-204ENST00000362093 RBMY1DP0C7P1 496 aaKnown RBP12.63□□□□□ -0.39
CKLF-204ENST00000362093 NPPCP23582 126 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 CRYBB3P26998 211 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 RAB11AP62491 216 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
CKLF-204ENST00000362093 GAMTQ14353 236 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 HAGHQ16775 308 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 ZNF431Q8TF32 576 aaPredicted RBP12.63□□□□□ -0.39
CKLF-204ENST00000362093 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 TM2D3Q9BRN9 247 aa12.63□□□□□ -0.39
CKLF-204ENST00000362093 KMT2CQ8NEZ4 4911 aaKnown RBP12.63□□□□□ -0.39
CKLF-204ENST00000362093 NKX2-1P43699 371 aaPredicted RBP12.62□□□□□ -0.39
CKLF-204ENST00000362093 POLR2GP62487 172 aaKnown RBP eCLIP12.62□□□□□ -0.39
CKLF-204ENST00000362093 Q8WTZ3 238 aa12.62□□□□□ -0.39
CKLF-204ENST00000362093 ST8SIA2Q92186 375 aa12.62□□□□□ -0.39
CKLF-204ENST00000362093 SEC22CQ9BRL7 303 aa12.62□□□□□ -0.39
CKLF-204ENST00000362093 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
CKLF-204ENST00000362093 COL7A1Q02388 2944 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 PRSS46E5RG02 174 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 TOMM40O96008 361 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 CD5P06127 495 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 BMI1P35226 326 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 IAH1Q2TAA2 248 aaPredicted RBP12.61□□□□□ -0.39
CKLF-204ENST00000362093 SPANXN5Q5MJ07 72 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 METTL26Q96S19 204 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 U3KQE9 123 aa12.61□□□□□ -0.39
CKLF-204ENST00000362093 IGKV1D-37A0A075B6S9 117 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 RD3LP0DJH9 198 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 PAX9P55771 341 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 TCF24Q7RTU0 167 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 ZBTB8BQ8NAP8 495 aaPredicted RBP12.6□□□□□ -0.39
CKLF-204ENST00000362093 SLC35E1Q96K37 410 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 SMIM8Q96KF7 97 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 CITED4Q96RK1 184 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 FAM110AQ9BQ89 295 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
CKLF-204ENST00000362093 PAIP2BQ9ULR5 123 aaKnown RBP12.6□□□□□ -0.39
CKLF-204ENST00000362093 STRAPQ9Y3F4 350 aaKnown RBP12.6□□□□□ -0.39
CKLF-204ENST00000362093 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 A0A1W2PS18 150 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 OR4C46A6NHA9 309 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 DFFBO76075 338 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 IL5P05113 134 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 PSG1P11464 419 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 C12orf45Q8N5I9 185 aaPredicted RBP12.59□□□□□ -0.39
CKLF-204ENST00000362093 WWC2-AS2Q96NR7 200 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 RCHY1Q96PM5 261 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 PSENENQ9NZ42 101 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 GSKIPQ9P0R6 139 aa12.59□□□□□ -0.39
CKLF-204ENST00000362093 PMS2P5A8MQ11 134 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 H3BP45 60 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 CCSO14618 274 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 SSSCA1O60232 199 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 USF2Q15853 346 aaPredicted RBP12.58□□□□□ -0.4
CKLF-204ENST00000362093 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 TRGV9Q99603 122 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 TMEM231Q9H6L2 316 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 UBQLN2Q9UHD9 624 aa12.58□□□□□ -0.4
CKLF-204ENST00000362093 IGKV3-7A0A075B6H7 116 aa12.57□□□□□ -0.4
CKLF-204ENST00000362093 IGKV1OR2-108A0A075B7D4 117 aa12.57□□□□□ -0.4
CKLF-204ENST00000362093 ZFP92A6NM28 416 aa12.57□□□□□ -0.4
CKLF-204ENST00000362093 MBPP02686 304 aaPredicted RBP12.57□□□□□ -0.4
CKLF-204ENST00000362093 IL4P05112 153 aa12.57□□□□□ -0.4
CKLF-204ENST00000362093 HNRNPCP07910 306 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■□□□□ 9.5
CKLF-204ENST00000362093 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
CKLF-204ENST00000362093 TAS2R30P59541 319 aa12.57□□□□□ -0.4
CKLF-204ENST00000362093 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms