RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TMEM140Q9NV12 185 aa10.43□□□□□ -0.74
VAMP1-201ENST00000361716 MRPL27Q9P0M9 148 aaKnown RBP10.43□□□□□ -0.74
VAMP1-201ENST00000361716 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 PPIAL4GP0DN37 164 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 COMMD5Q9GZQ3 224 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 SH3BGRL2Q9UJC5 107 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 PILRBQ9UKJ0 227 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 IGHV3-21A0A0B4J1V1 117 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 A0A0G2JLM5 398 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 DNPH1O43598 174 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 FOXF2Q12947 444 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 K7EMI3 77 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 TAS2R45P59539 299 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 DHRS13Q6UX07 377 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 OR9G1Q8NH87 305 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 RNF138Q8WVD3 245 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 TNFRSF14Q92956 283 aa10.42□□□□□ -0.74
VAMP1-201ENST00000361716 GFRA3O60609 400 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 SLC25A5P05141 298 aaKnown RBP10.41□□□□□ -0.74
VAMP1-201ENST00000361716 NBEAP1P0C6P0 100 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 REG1BP48304 166 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 TRIP6Q15654 476 aaKnown RBP10.41□□□□□ -0.74
VAMP1-201ENST00000361716 PMS2CLQ68D20 193 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 Q6ZR03 302 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 ASCL2Q99929 193 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 A6NDN8 102 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 AREGP15514 252 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 CCL11P51671 97 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 GUSBP1Q15486 140 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 PRSS3P2Q8NHM4 247 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 KLF14Q8TD94 323 aaPredicted RBP10.41□□□□□ -0.74
VAMP1-201ENST00000361716 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 AKAP13Q12802 2813 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
VAMP1-201ENST00000361716 SMIM27A0A1W2PRY6 76 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 GCSHP23434 173 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 JKAMPQ9P055 326 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 HCFC1P51610 2035 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 SERTM2A0A1B0GWG4 89 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 COLCA1Q6ZS62 124 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
VAMP1-201ENST00000361716 G3V4G9 280 aa10.4□□□□□ -0.75
VAMP1-201ENST00000361716 BMI1P35226 326 aa10.4□□□□□ -0.75
VAMP1-201ENST00000361716 FLYWCH2Q96CP2 140 aaKnown RBP10.4□□□□□ -0.75
VAMP1-201ENST00000361716 ZNRD1Q9P1U0 126 aa10.4□□□□□ -0.75
VAMP1-201ENST00000361716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.39□□□□□ -0.75
VAMP1-201ENST00000361716 TEX48A0A1B0GUV7 120 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 TRGV5A0A0B4J1U4 118 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 COX7A2P2O60397 106 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 REG1AP05451 166 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 RBPJQ06330 500 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 MORN5Q5VZ52 161 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 FAM214BQ7L5A3 538 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 LINC00596Q86U02 117 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 KLF13Q9Y2Y9 288 aaPredicted RBP10.39□□□□□ -0.75
VAMP1-201ENST00000361716 ORM2P19652 201 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 FCER1GP30273 86 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 HBBP68871 147 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 C11orf52Q96A22 123 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 OR51B2Q9Y5P1 312 aa10.39□□□□□ -0.75
VAMP1-201ENST00000361716 FABP2P12104 132 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 PRB3Q04118 309 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-201ENST00000361716 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 Q8IYB0 196 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 ZBTB34Q8NCN2 500 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 TSSC4Q9Y5U2 329 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-201ENST00000361716 NAV3Q8IVL0 2385 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 TNRC6AQ8NDV7 1962 aaKnown RBP10.38□□□□□ -0.75
VAMP1-201ENST00000361716 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 TRBV6-6A0A0A6YYG2 114 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 A0A1B0GV72 72 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 COQ2Q96H96 371 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 CHODLQ9H9P2 273 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 KLRC4-KLRK1H3BQV0 150 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 P01737 135 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 APOHP02749 345 aaPredicted RBP10.38□□□□□ -0.75
VAMP1-201ENST00000361716 ADH4P08319 380 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 GRAMD2BQ96HH9 432 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 PKIBQ9C010 78 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 SCRT2Q9NQ03 307 aa10.38□□□□□ -0.75
VAMP1-201ENST00000361716 ATMQ13315 3056 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 IGLV2-8P01709 118 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 LIPFP07098 398 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 C8orf88P0DMB2 117 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 PRDX2P32119 198 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 ACP7Q6ZNF0 438 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 MOGAT3Q86VF5 341 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 RBMXL3Q8N7X1 1067 aaKnown RBP10.37□□□□□ -0.75
VAMP1-201ENST00000361716 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 A0A1W2PRD5 423 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 A0A1W2PRF3 423 aa10.37□□□□□ -0.75
VAMP1-201ENST00000361716 A0A1W2PRM7 423 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms