RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 LYZL4Q96KX0 146 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 JPT2Q9H910 190 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 OSTCQ9NRP0 149 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 ANKRD36A6QL64 1941 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 PSMG4Q5JS54 123 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 HEPN1Q6WQI6 88 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 TIMP3P35625 211 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 RGPD3A6NKT7 1758 aaPredicted RBP13.34□□□□□ -0.27
COL18A1-203ENST00000359759 RPL15P61313 204 aaKnown RBP13.34□□□□□ -0.27
COL18A1-203ENST00000359759 MORN2Q502X0 79 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 SLC50A1Q9BRV3 221 aa13.34□□□□□ -0.27
COL18A1-203ENST00000359759 IGHV3-53P01767 116 aa13.33□□□□□ -0.27
COL18A1-203ENST00000359759 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.27
COL18A1-203ENST00000359759 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
COL18A1-203ENST00000359759 BCL6BQ8N143 479 aaPredicted RBP13.33□□□□□ -0.28
COL18A1-203ENST00000359759 HIST3H2BBQ8N257 126 aa13.33□□□□□ -0.28
COL18A1-203ENST00000359759 EXOC3-AS1Q8N2X6 119 aa13.33□□□□□ -0.28
COL18A1-203ENST00000359759 NEU4Q8WWR8 484 aaPredicted RBP13.33□□□□□ -0.28
COL18A1-203ENST00000359759 PVRIGQ6DKI7 326 aa13.33□□□□□ -0.28
COL18A1-203ENST00000359759 IQCF6A8MYZ5 107 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 LGALS1P09382 135 aaKnown RBP13.32□□□□□ -0.28
COL18A1-203ENST00000359759 TPTE2P1Q5T6R2 138 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 MCRIP2Q9BUT9 160 aaKnown RBP13.32□□□□□ -0.28
COL18A1-203ENST00000359759 TRBV6-7A0A0A0MS04 114 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 EPOPA6NHQ4 379 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 AMBPP02760 352 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 TCRAP04437 139 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 SSBP2P81877 361 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-203ENST00000359759 GUSBP1Q15486 140 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 IGLV3-21P80748 117 aaPredicted RBP13.32□□□□□ -0.28
COL18A1-203ENST00000359759 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 ZNF497Q6ZNH5 498 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 TSKUQ8WUA8 353 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 TRAV8-3A0A0A6YYJ7 113 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 TGFBR3LH3BV60 316 aa13.32□□□□□ -0.28
COL18A1-203ENST00000359759 LY6G6FQ5SQ64 297 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 TEX38Q6PEX7 206 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 SPTBP11277 2137 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 PTPRFP10586 1907 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 A0A0A6YYD4 124 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
COL18A1-203ENST00000359759 KNL1Q8NG31 2342 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 HEATR5BQ9P2D3 2071 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 INS-IGF2F8WCM5 200 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 H0YIZ8 118 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 INSP01308 110 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 NR2C2APQ86WQ0 139 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 SEC11AP67812 179 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 C9orf106Q8NAJ2 232 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 DNAJC13O75165 2243 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 TRGV11A0A075B6L2 103 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 C17orf100A8MU93 164 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 COX11Q9Y6N1 276 aa13.31□□□□□ -0.28
COL18A1-203ENST00000359759 ITGB1BP1O14713 200 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 TNFSF13O75888 250 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 GTF3AQ92664 365 aaKnown RBP13.3□□□□□ -0.28
COL18A1-203ENST00000359759 ZNF319Q9P2F9 582 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 MYOD1P15172 320 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 MORN3Q6PF18 240 aaPredicted RBP13.3□□□□□ -0.28
COL18A1-203ENST00000359759 RFNGQ9Y644 331 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 SNRNP200O75643 2136 aaKnown RBP13.3□□□□□ -0.28
COL18A1-203ENST00000359759 ESDP10768 282 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
COL18A1-203ENST00000359759 A0A1B0GTI1 187 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 DUSP14O95147 198 aaKnown RBP13.29□□□□□ -0.28
COL18A1-203ENST00000359759 LCN12Q6JVE5 192 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 C8orf46Q8TAG6 207 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 RCHY1Q96PM5 261 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 TMEM238C9JI98 176 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 J3QW42 95 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 YPEL1O60688 119 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 GAGE2AQ6NT46 116 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-203ENST00000359759 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 PSG1P11464 419 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 MLNRO43193 412 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 PMS2P5A8MQ11 134 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 TIMM23O14925 209 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 PAX8Q06710 450 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 LYZL1Q6UWQ5 148 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 TMEM133Q9H2Q1 129 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 GREM1O60565 184 aa13.29□□□□□ -0.28
COL18A1-203ENST00000359759 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 IGFL4Q6B9Z1 124 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 IGKV1D-8A0A087WSZ0 117 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 VWC2LB2RUY7 222 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 F2Z2F3 143 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 F8VVB4 439 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 F8VWA3 439 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 NDPQ00604 133 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 TMEM219Q86XT9 240 aa13.28□□□□□ -0.28
COL18A1-203ENST00000359759 PPBPP02775 128 aa13.27□□□□□ -0.28
COL18A1-203ENST00000359759 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.28
COL18A1-203ENST00000359759 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.28
COL18A1-203ENST00000359759 BMPERQ8N8U9 685 aa13.27□□□□□ -0.28
COL18A1-203ENST00000359759 IFI6P09912 130 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms