RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 K7EIM0 57 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 IGHV3-48P01763 117 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 IGF1P05019 195 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 SELENOTP62341 195 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 PRR20EP86478 221 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 PRR20CP86479 221 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 PRR20DP86480 221 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 PRR20BP86481 221 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 PRR20AP86496 221 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 OR10G4Q8NGN3 311 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 OR10G9Q8NGN4 311 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 OR10G7Q8NGN6 311 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 OR4X1Q8NH49 305 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 LYPD6BQ8NI32 183 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 MARC2Q969Z3 335 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 CITED4Q96RK1 184 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 TRGV9Q99603 122 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 ACTR3CQ9C0K3 210 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 TNFRSF19Q9NS68 423 aa10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 MRPL36Q9P0J6 103 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-203ENST00000359265 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 G3V318 75 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 AP4M1O00189 453 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 YIF1AO95070 293 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 KLK9Q2XQG4 91 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 C19orf54Q5BKX5 351 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 FAM122CQ6P4D5 195 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 BPIFCQ8NFQ6 507 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 ZNF580Q9UK33 172 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 KLK9Q9UKQ9 250 aa10.85□□□□□ -0.67
PDLIM5-203ENST00000359265 IGKV1D-37A0A075B6S9 117 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 RAB19A4D1S5 217 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 MAP1LC3B2A6NCE7 125 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 MFSD2BA6NFX1 497 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 SCGB2A1O75556 95 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 OR2J3O76001 311 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 FABP1P07148 127 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 NPBWR1P48145 328 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 CDC34P49427 236 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 MFAP4P55083 255 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 BLCAPP62952 87 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 MBD3L1Q8WWY6 194 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 MAP1LC3BQ9GZQ8 125 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 SLC25A22Q9H936 323 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
PDLIM5-203ENST00000359265 TRAV30A0A087WSZ9 112 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 A0A1W2PPV4 95 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 SEC14L6B5MCN3 397 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 H3BUA1 57 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 CLN5O75503 358 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 NDUFB8O95169 186 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 LINC00869P0C866 280 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 RHOBP62745 196 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 ZNF726P1Q15940 193 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 RPP25LQ8N5L8 163 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 EIF4E3Q8N5X7 224 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 NECAP1Q8NC96 275 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 VN1R17PQ8TDU5 208 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 SFT2D1Q8WV19 159 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 JMJD8Q96S16 334 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 PRSS22Q9GZN4 317 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 C21orf62Q9NYP8 219 aa10.83□□□□□ -0.68
PDLIM5-203ENST00000359265 TRBV9A0A0B4J1U6 114 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 A0A1B0GV50 99 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 GNG7O60262 68 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 IGLC1P0CG04 106 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 S100A1P23297 94 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 RHOGP84095 191 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 Q56UQ5 140 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 SPSB3Q6PJ21 355 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 UQCC3Q6UW78 93 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 LCN15Q6UWW0 184 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 OR1L4Q8NGR5 311 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 RAB24Q969Q5 203 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 RNF2Q99496 336 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 TXN2Q99757 166 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 PBDC1Q9BVG4 233 aa10.82□□□□□ -0.68
PDLIM5-203ENST00000359265 FAM223BA6NKX1 122 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 CLDN34H7C241 214 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 BRI3O95415 125 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 GATA2P23769 480 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 FCGR2BP31994 310 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 ZNF90Q03938 601 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 GCSAMLQ5JQS6 135 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 HIST2H2BDQ6DRA6 164 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 SSX7Q7RTT5 188 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 FAM223AQ8IWN6 122 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 PFDN5Q99471 154 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 GAR1Q9NY12 217 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 LINC00527Q9UJ94 153 aa10.81□□□□□ -0.68
PDLIM5-203ENST00000359265 DNAJC9-AS1A6NH13 148 aa10.8□□□□□ -0.68
PDLIM5-203ENST00000359265 COX7A2P2O60397 106 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms