RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ZNF137PP52743 207 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 EIF4EBP1Q13541 118 aaPredicted RBP9.08□□□□□ -0.96
SSU72-202ENST00000359060 C19orf35Q6ZS72 473 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 PPP1R27Q86WC6 154 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 VN1R17PQ8TDU5 208 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 TBX15Q96SF7 602 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 TMUB1Q9BVT8 246 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 P01737 135 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 AREGP15514 252 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 ADMP35318 185 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 KLRB1Q12918 225 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 NCOR1P1Q9H4R4 102 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 A0A1B0GUS0 222 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 CD99P14209 185 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 PRNTQ86SH4 94 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 SRSF12Q8WXF0 261 aaKnown RBP9.08□□□□□ -0.96
SSU72-202ENST00000359060 RBM14Q96PK6 669 aaKnown RBP9.08□□□□□ -0.96
SSU72-202ENST00000359060 CTSZQ9UBR2 303 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
SSU72-202ENST00000359060 LOC105371242A0A075B767 164 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 K7ENP7 123 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 CORTO00230 105 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 DDTP30046 118 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 TMEM177Q53S58 311 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 TXN2Q99757 166 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 TCRBV4S1A1TA0A5B7 111 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 PEX7O00628 323 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 GGCTO75223 188 aaKnown RBP9.07□□□□□ -0.96
SSU72-202ENST00000359060 APCSP02743 223 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 HIST1H1EP10412 219 aaKnown RBP9.07□□□□□ -0.96
SSU72-202ENST00000359060 CNTFRP26992 372 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 GRNP28799 593 aaKnown RBP9.07□□□□□ -0.96
SSU72-202ENST00000359060 SRIP30626 198 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 TMEM256Q8N2U0 113 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 VAMP8Q9BV40 100 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 ARHGAP32A7KAX9 2087 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 WT1-ASQ06250 92 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 KIR3DL3Q8N743 410 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 OR5AN1Q8NGI8 311 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 DPM3Q9P2X0 92 aa9.07□□□□□ -0.96
SSU72-202ENST00000359060 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 TIMM23O14925 209 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 CDKN1AP38936 164 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 NBL1P41271 181 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 ZNF833PQ6ZTB9 187 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 GCGP01275 180 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 CGB3P0DN86 165 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 CGB7P0DN87 165 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 PRSS8Q16651 343 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 PRR31Q5SQ13 230 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 CDPF1Q6NVV7 123 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 OR4A5Q8NH83 315 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 WNT10AQ9GZT5 417 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 NBEAQ8NFP9 2946 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 SERTM2A0A1B0GWG4 89 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 CD33P20138 364 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 FCGR2BP31994 310 aaPredicted RBP9.06□□□□□ -0.96
SSU72-202ENST00000359060 TMEM155Q4W5P6 130 aa9.06□□□□□ -0.96
SSU72-202ENST00000359060 LSM4Q9Y4Z0 139 aaKnown RBP9.06□□□□□ -0.96
SSU72-202ENST00000359060 IGHV1-3A0A0C4DH29 117 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 LY6DQ14210 128 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 ECSCRQ19T08 205 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 ASPHD1Q5U4P2 390 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 NOTCH3Q9UM47 2321 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 IGHV3OR16-8A0A075B7F1 116 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 TMSB15BA0A087X1C1 80 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 CSN3P07498 182 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 BRS3P32247 399 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 FOXL1Q12952 345 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 KLRD1Q13241 179 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 POU2AF1Q16633 256 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 GOLT1AQ6ZVE7 132 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 NOL4LQ96MY1 436 aaPredicted RBP9.05□□□□□ -0.96
SSU72-202ENST00000359060 THYN1Q9P016 225 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 NAGKQ9UJ70 344 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 IGHV3-23P01764 117 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 MT-ND6P03923 174 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 IL4P05112 153 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 Q8NA96 180 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 CSPG4Q6UVK1 2322 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 SERF1AO75920 110 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 KLF17Q5JT82 389 aaPredicted RBP9.05□□□□□ -0.96
SSU72-202ENST00000359060 TEX45Q8NA69 505 aa9.05□□□□□ -0.96
SSU72-202ENST00000359060 PRR20EP86478 221 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 PRR20CP86479 221 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 PRR20DP86480 221 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 PRR20BP86481 221 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 PRR20AP86496 221 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 COX19Q49B96 90 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 SHISA9B4DS77 424 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 HLA-DQA1P01909 254 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 MAS1LP35410 378 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
SSU72-202ENST00000359060 ACTL10Q5JWF8 245 aa9.04□□□□□ -0.96
SSU72-202ENST00000359060 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms