RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 TMEM200BQ69YZ2 307 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 TMEM133Q9H2Q1 129 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 RNF24Q9Y225 148 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 TRAV3A0A0B4J244 114 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 CORTO00230 105 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 PIMREGQ9BSJ6 248 aa12.95□□□□□ -0.34
EPHB4-201ENST00000358173 MRPL32Q9BYC8 188 aaKnown RBP12.95□□□□□ -0.34
EPHB4-201ENST00000358173 MYOD1P15172 320 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 PDLIM4P50479 330 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 DLX1P56177 255 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.94□□□□□ -0.34
EPHB4-201ENST00000358173 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
EPHB4-201ENST00000358173 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
EPHB4-201ENST00000358173 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.346e-8■■□□□ 11.4
EPHB4-201ENST00000358173 OR10W1Q8NGF6 305 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 CA1P00915 261 aaPredicted RBP12.94□□□□□ -0.34
EPHB4-201ENST00000358173 IGKV1-39P01597 117 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 IGKV1D-39P04432 117 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 COL8A2P25067 703 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 GOSR1O95249 250 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 GOLT1AQ6ZVE7 132 aa12.94□□□□□ -0.34
EPHB4-201ENST00000358173 ZFYVE26Q68DK2 2539 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 PF4V1P10720 104 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 SRSF12Q8WXF0 261 aaKnown RBP12.93□□□□□ -0.34
EPHB4-201ENST00000358173 GAFA1Q96PS6 74 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 UFC1Q9Y3C8 167 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 NBEAP1P0C6P0 100 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 NRN1Q9NPD7 142 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 TRANK1O15050 2925 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 THBDP07204 575 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 IGFL2Q6UWQ7 119 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 ZNF788Q6ZQV5 615 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 OR4A5Q8NH83 315 aa12.93□□□□□ -0.34
EPHB4-201ENST00000358173 BPIFA4PQ86YQ2 179 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 C15orf62A8K5M9 175 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 PEX7O00628 323 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 FOXH1O75593 365 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-201ENST00000358173 C19orf35Q6ZS72 473 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 XIRP2A4UGR9 3374 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 PYYP10082 97 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 FAM168AQ92567 244 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 AGMATQ9BSE5 352 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 GZMBP10144 247 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
EPHB4-201ENST00000358173 ST6GALNAC3Q8NDV1 305 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 NUP37Q8NFH4 326 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 LYPD6BQ8NI32 183 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 MGST2Q99735 147 aa12.92□□□□□ -0.34
EPHB4-201ENST00000358173 MBNL3Q9NUK0 354 aaKnown RBP12.92□□□□□ -0.34
EPHB4-201ENST00000358173 NAV2Q8IVL1 2488 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 M0QZ24 198 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 UPK2O00526 184 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 IGLV1-44P01699 117 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 FAM169BQ8N8A8 192 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-201ENST00000358173 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 NPIPB11E5RHQ5 1161 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 GRNP28799 593 aaKnown RBP12.91□□□□□ -0.34
EPHB4-201ENST00000358173 ERVK11-1P61568 191 aa12.91□□□□□ -0.34
EPHB4-201ENST00000358173 IGHV2-70P01814 119 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 ST6GALNAC6Q969X2 333 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-201ENST00000358173 TLN2Q9Y4G6 2542 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 PFN1P07737 140 aaKnown RBP12.9□□□□□ -0.34
EPHB4-201ENST00000358173 HBBP68871 147 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 KLRD1Q13241 179 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 WFDC3Q8IUB2 231 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 IGHV3-49A0A0A0MS15 119 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 A0A1B0GUS0 222 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 TIMM23O14925 209 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 GNG5P63218 68 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 MIEN1Q9BRT3 115 aa12.9□□□□□ -0.34
EPHB4-201ENST00000358173 HIGD1CA8MV81 97 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 TRAV9-1A0A075B6T8 112 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 FOXL1Q12952 345 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 GTF2H5Q6ZYL4 71 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 IGKV1-16P04430 117 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 CACNG8Q8WXS5 425 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 TRAV5A0A0B4J249 113 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 IL4P05112 153 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 IGHV1-8P0DP01 117 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 NMUP48645 174 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 SLC25A34Q6PIV7 304 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 C7orf69Q9H7B7 122 aa12.89□□□□□ -0.35
EPHB4-201ENST00000358173 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
EPHB4-201ENST00000358173 ACTL10Q5JWF8 245 aa12.88□□□□□ -0.35
EPHB4-201ENST00000358173 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms