RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 LOC102724200A0A096LPH7 203 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF785A8K8V0 405 aa3.42□□□□□ -1.86
SYNE2-204ENST00000358025 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
SYNE2-204ENST00000358025 NCKAP5O14513 1909 aa3.42□□□□□ -1.86
SYNE2-204ENST00000358025 LILRA1O75019 489 aa3.42□□□□□ -1.86
SYNE2-204ENST00000358025 SCGB3A1Q96QR1 104 aa3.42□□□□□ -1.86
SYNE2-204ENST00000358025 OR8A1Q8NGG7 326 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 LSM4Q9Y4Z0 139 aaKnown RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 SHISA7A6NL88 538 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF716A6NP11 495 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 MOSP00540 346 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF502Q8TBZ5 544 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 LIME1Q9H400 295 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 C2CD4DB7Z1M9 353 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 H7C1H1 209 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 SSBP3Q9BWW4 388 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 PRR13Q9NZ81 148 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 GLRXP35754 106 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ORMDL2Q53FV1 153 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 RTN4RL2Q86UN3 420 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 C12orf77C9JDV5 145 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 CCL25O15444 150 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNHIT1O43257 154 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 AMN1Q8IY45 258 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF562Q6V9R5 426 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 IMUPQ9GZP8 106 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 H0Y8X5 98 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 RBP4P02753 201 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 LOXL4Q96JB6 756 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 GATA4P43694 442 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 FOXI2Q6ZQN5 318 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 IGKV1D-13A0A0B4J2D9 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 IGKV1-5P01602 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 IGKV1-13P0DP09 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 NTF4P34130 210 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 FOXL2P58012 376 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 NBASA2RRP1 2371 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 PCDH15Q96QU1 1955 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 HOXA3O43365 443 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF418Q8TF45 676 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF479Q96JC4 524 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF747Q9BV97 191 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 RAXQ9Y2V3 346 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 COL11A2P13942 1736 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 APOHP02749 345 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 A0A1W2PRD5 423 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 A0A1W2PRF3 423 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 A0A1W2PRM7 423 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM177Q53S58 311 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 FAM19A2Q8N3H0 131 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 ATP6V0E2Q8NHE4 81 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 GLMPQ8WWB7 406 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 GAGE5Q13069 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 GAGE6Q13070 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 C3AR1Q16581 482 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 SP5Q6BEB4 398 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 TPRX1Q8N7U7 411 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 IGKV1D-8A0A087WSZ0 117 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 H3BUT2 72 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 AKIRIN1Q9H9L7 192 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-204ENST00000358025 KIAA1671Q9BY89 1806 aa3.41□□□□□ -1.86
SYNE2-204ENST00000358025 A0A1W2PR77 199 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 GUSBP1Q15486 140 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 ZCCHC24Q8N2G6 241 aaKnown RBP3.4□□□□□ -1.86
SYNE2-204ENST00000358025 ID1P41134 155 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 PPIAL4DF5H284 164 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 K7EM74 188 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 C5orf24Q7Z6I8 188 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 DYNLRB1Q9NP97 96 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 CLPSP04118 112 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 PDCD1Q15116 288 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 YAE1D1Q9NRH1 226 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 PROCRQ9UNN8 238 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 A0A1W2PPM0 123 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 S100A4P26447 101 aaKnown RBP3.4□□□□□ -1.86
SYNE2-204ENST00000358025 KLRD1Q13241 179 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 TCRBV4S1A1TA0A5B7 111 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 IGHV3-9P01782 118 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 PEAR1Q5VY43 1037 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-204ENST00000358025 APOMO95445 188 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 HLA-DMBP28068 263 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 ZFP36L1Q07352 338 aaKnown RBP3.4□□□□□ -1.86
SYNE2-204ENST00000358025 MOB3BQ86TA1 216 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 FNDC4Q9H6D8 234 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-204ENST00000358025 C12orf49Q9H741 205 aa3.4□□□□□ -1.86
SYNE2-204ENST00000358025 A0A096LPE4 126 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 A0A1W2PPZ6 126 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 GAGE12HA6NDE8 117 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-204ENST00000358025 A0A1B0GWB2 263 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 GDF9O60383 454 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 GFRA3O60609 400 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 IGKCP01834 107 aa3.4□□□□□ -1.87
SYNE2-204ENST00000358025 TMEM92Q6UXU6 159 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms