RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CTSGP08311 255 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 RPL12P30050 165 aaKnown RBP11.43□□□□□ -0.58
CCNE1-202ENST00000357943 ARL3P36405 182 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 NPBWR1P48145 328 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 ZNF616Q08AN1 781 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 OR2F1Q13607 317 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 FHL3Q13643 280 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 ZNF345Q14585 488 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 TMUB2Q71RG4 321 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
CCNE1-202ENST00000357943 SLC25A31Q9H0C2 315 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 A0A0D9SG52 128 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 LINC01619G3V211 115 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 GNG7O60262 68 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 CLN5O75503 358 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 C4BPBP20851 252 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 S100A11P31949 105 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 ADMP35318 185 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 OPCMLQ14982 345 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 KCNRGQ8N5I3 272 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 INO80EQ8NBZ0 244 aaPredicted RBP11.42□□□□□ -0.58
CCNE1-202ENST00000357943 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 DPF1Q92782 380 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 SLC35E1Q96K37 410 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 OR4F4Q96R69 305 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 ATP6V0BQ99437 205 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 OR2C1O95371 312 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 HOXD3P31249 432 aaPredicted RBP11.42□□□□□ -0.58
CCNE1-202ENST00000357943 AP2S1P53680 142 aaPredicted RBP11.42□□□□□ -0.58
CCNE1-202ENST00000357943 SLURP1P55000 103 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 ARL6Q9H0F7 186 aa11.42□□□□□ -0.58
CCNE1-202ENST00000357943 WNK1Q9H4A3 2382 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 M0QZ24 198 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 NUPL2O15504 423 aaKnown RBP11.41□□□□□ -0.58
CCNE1-202ENST00000357943 GGCTO75223 188 aaKnown RBP11.41□□□□□ -0.58
CCNE1-202ENST00000357943 PF4P02776 101 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 MYCNOSP40205 109 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 DLK1P80370 383 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 BAXQ07812 192 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 RPEL1Q2QD12 228 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 AQP10Q96PS8 301 aa11.41□□□□□ -0.58
CCNE1-202ENST00000357943 GAR1Q9NY12 217 aaKnown RBP11.41□□□□□ -0.58
CCNE1-202ENST00000357943 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 OR10J1P30954 320 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 NUP62P37198 522 aaPredicted RBP11.4□□□□□ -0.58
CCNE1-202ENST00000357943 HBG1P69891 147 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 HBG2P69892 147 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 AKR1C1Q04828 323 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 SPSB3Q6PJ21 355 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 LILRB2Q8N423 598 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 GGACTQ9BVM4 153 aa11.4□□□□□ -0.58
CCNE1-202ENST00000357943 IGKV1D-37A0A075B6S9 117 aa11.39□□□□□ -0.59
CCNE1-202ENST00000357943 SCAF4O95104 1147 aaKnown RBP11.39□□□□□ -0.59
CCNE1-202ENST00000357943 ZP3P21754 424 aa11.39□□□□□ -0.59
CCNE1-202ENST00000357943 CLINT1Q14677 625 aa11.39□□□□□ -0.59
CCNE1-202ENST00000357943 TIGITQ495A1 244 aa11.39□□□□□ -0.59
CCNE1-202ENST00000357943 TREML4Q6UXN2 200 aa11.39□□□□□ -0.59
CCNE1-202ENST00000357943 DLX4Q92988 240 aaPredicted RBP11.39□□□□□ -0.59
CCNE1-202ENST00000357943 NPVFQ9HCQ7 196 aa11.39□□□□□ -0.59
CCNE1-202ENST00000357943 ZFP92A6NM28 416 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 FNDC10F2Z333 226 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 SYNJ2BPP57105 145 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 ZNF90Q03938 601 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 TMEM144Q7Z5S9 345 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 THAP8Q8NA92 274 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 SMIM3Q9BZL3 60 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 UQCC1Q9NVA1 299 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 BCL2L11O43521 198 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
CCNE1-202ENST00000357943 VWC2Q2TAL6 325 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 UNQ9165/PRO28630Q6UXU0 137 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 TMEM147Q9BVK8 224 aa11.38□□□□□ -0.59
CCNE1-202ENST00000357943 IGHV3OR16-8A0A075B7F1 116 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 UBE2L5PA0A1B0GUS4 154 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 KANTRA0A1W2PQU2 76 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 M6PRP20645 277 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
CCNE1-202ENST00000357943 ATP6V1FQ16864 119 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
CCNE1-202ENST00000357943 RCC1LQ96I51 464 aaKnown RBP11.37□□□□□ -0.59
CCNE1-202ENST00000357943 LSM4Q9Y4Z0 139 aaKnown RBP11.37□□□□□ -0.59
CCNE1-202ENST00000357943 ZNF320A2RRD8 509 aa11.36□□□□□ -0.59
CCNE1-202ENST00000357943 SCGB2A1O75556 95 aa11.36□□□□□ -0.59
CCNE1-202ENST00000357943 YIF1AO95070 293 aa11.36□□□□□ -0.59
CCNE1-202ENST00000357943 FAM106AQ4KMX7 169 aa11.36□□□□□ -0.59
CCNE1-202ENST00000357943 TEX261Q6UWH6 196 aa11.36□□□□□ -0.59
CCNE1-202ENST00000357943 TMEM182Q6ZP80 229 aaPredicted RBP11.36□□□□□ -0.59
CCNE1-202ENST00000357943 SLC51BQ86UW2 128 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms