RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TXN2Q99757 166 aa19.53■□□□□ 0.72
SSBP3-202ENST00000357475 TGOLN2O43493 480 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 IGLC1P0CG04 106 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 ARL3P36405 182 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 VWC2Q2TAL6 325 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 TIGITQ495A1 244 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 TREML4Q6UXN2 200 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 OR11H1Q8NG94 326 aa19.52■□□□□ 0.72
SSBP3-202ENST00000357475 UBE2L5PA0A1B0GUS4 154 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 IGKV1-17P01599 117 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 NPBWR1P48145 328 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 NKX2-5P52952 324 aaPredicted RBP19.51■□□□□ 0.71
SSBP3-202ENST00000357475 TMEM147Q9BVK8 224 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 GGACTQ9BVM4 153 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 UQCC1Q9NVA1 299 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 HSPB1P04792 205 aaKnown RBP19.51■□□□□ 0.71
SSBP3-202ENST00000357475 OR10J1P30954 320 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 OR1N2Q8NGR9 330 aa19.51■□□□□ 0.71
SSBP3-202ENST00000357475 VWFP04275 2813 aa19.5■□□□□ 0.71
SSBP3-202ENST00000357475 SCAF4O95104 1147 aaKnown RBP19.5■□□□□ 0.71
SSBP3-202ENST00000357475 OR2C1O95371 312 aa19.5■□□□□ 0.71
SSBP3-202ENST00000357475 ZNF90Q03938 601 aa19.5■□□□□ 0.71
SSBP3-202ENST00000357475 TMEM144Q7Z5S9 345 aa19.5■□□□□ 0.71
SSBP3-202ENST00000357475 THAP8Q8NA92 274 aa19.5■□□□□ 0.71
SSBP3-202ENST00000357475 NPVFQ9HCQ7 196 aa19.5■□□□□ 0.71
SSBP3-202ENST00000357475 WNK1Q9H4A3 2382 aa19.49■□□□□ 0.71
SSBP3-202ENST00000357475 FNDC10F2Z333 226 aa19.49■□□□□ 0.71
SSBP3-202ENST00000357475 SLURP1P55000 103 aa19.49■□□□□ 0.71
SSBP3-202ENST00000357475 LGALSLQ3ZCW2 172 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-202ENST00000357475 SHISA2Q6UWI4 295 aa19.49■□□□□ 0.71
SSBP3-202ENST00000357475 TMEM182Q6ZP80 229 aaPredicted RBP19.49■□□□□ 0.71
SSBP3-202ENST00000357475 HYLS1Q96M11 299 aa19.49■□□□□ 0.71
SSBP3-202ENST00000357475 ATP5SQ99766 215 aa19.49■□□□□ 0.71
SSBP3-202ENST00000357475 LSM4Q9Y4Z0 139 aaKnown RBP19.49■□□□□ 0.71
SSBP3-202ENST00000357475 CCL24O00175 119 aa19.48■□□□□ 0.71
SSBP3-202ENST00000357475 ATP6V1FQ16864 119 aa19.48■□□□□ 0.71
SSBP3-202ENST00000357475 KCNRGQ8N5I3 272 aa19.48■□□□□ 0.71
SSBP3-202ENST00000357475 ATP6V0BQ99437 205 aa19.48■□□□□ 0.71
SSBP3-202ENST00000357475 WDR83OSQ9Y284 106 aa19.48■□□□□ 0.71
SSBP3-202ENST00000357475 ZFP92A6NM28 416 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 BOLA2-SMG1P6H3BVE0 249 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 NUPL2O15504 423 aaKnown RBP19.47■□□□□ 0.71
SSBP3-202ENST00000357475 OR2F1Q13607 317 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 FHL3Q13643 280 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 ZNF345Q14585 488 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 MGST2Q99735 147 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 TRRAPQ9Y4A5 3859 aa19.47■□□□□ 0.71
SSBP3-202ENST00000357475 LINC01619G3V211 115 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 GGCTO75223 188 aaKnown RBP19.46■□□□□ 0.71
SSBP3-202ENST00000357475 GATA2P23769 480 aaPredicted RBP19.46■□□□□ 0.71
SSBP3-202ENST00000357475 HOXD3P31249 432 aaPredicted RBP19.46■□□□□ 0.71
SSBP3-202ENST00000357475 ZNF616Q08AN1 781 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 LAMTOR1Q6IAA8 161 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 GAR1Q9NY12 217 aaKnown RBP19.46■□□□□ 0.71
SSBP3-202ENST00000357475 IGHV3OR16-8A0A075B7F1 116 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 TSPAN15O95858 294 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 SPSB3Q6PJ21 355 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 TEPPQ6URK8 271 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 C9orf62Q8N4C0 152 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 SPATA3Q8NHX4 192 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 DPF1Q92782 380 aa19.46■□□□□ 0.71
SSBP3-202ENST00000357475 FGF7P21781 194 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 FAM209BQ5JX69 171 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 BTNL8Q6UX41 500 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 UNQ9165/PRO28630Q6UXU0 137 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 TMUB2Q71RG4 321 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 CYTL1Q9NRR1 136 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 RFNGQ9Y644 331 aa19.45■□□□□ 0.7
SSBP3-202ENST00000357475 TRAV30A0A087WSZ9 112 aa19.44■□□□□ 0.7
SSBP3-202ENST00000357475 RPEL1Q2QD12 228 aa19.44■□□□□ 0.7
SSBP3-202ENST00000357475 KRTAP21-3Q3LHN1 58 aa19.44■□□□□ 0.7
SSBP3-202ENST00000357475 RPL7L1Q6DKI1 246 aaKnown RBP19.44■□□□□ 0.7
SSBP3-202ENST00000357475 RCC1LQ96I51 464 aaKnown RBP19.44■□□□□ 0.7
SSBP3-202ENST00000357475 TRGV9Q99603 122 aa19.44■□□□□ 0.7
SSBP3-202ENST00000357475 WDR61Q9GZS3 305 aaKnown RBP19.44■□□□□ 0.7
SSBP3-202ENST00000357475 AGPAT2O15120 278 aa19.43■□□□□ 0.7
SSBP3-202ENST00000357475 DFFBO76075 338 aa19.43■□□□□ 0.7
SSBP3-202ENST00000357475 PSG1P11464 419 aa19.43■□□□□ 0.7
SSBP3-202ENST00000357475 ARL6Q9H0F7 186 aa19.43■□□□□ 0.7
SSBP3-202ENST00000357475 DNHD1Q96M86 4753 aa19.42■□□□□ 0.7
SSBP3-202ENST00000357475 A0A0D9SG52 128 aa19.42■□□□□ 0.7
SSBP3-202ENST00000357475 SYNJ2BPP57105 145 aa19.42■□□□□ 0.7
SSBP3-202ENST00000357475 CYP2G1PQ6ZSU1 146 aa19.42■□□□□ 0.7
SSBP3-202ENST00000357475 DLX4Q92988 240 aaPredicted RBP19.42■□□□□ 0.7
SSBP3-202ENST00000357475 GGTLC1Q9BX51 225 aa19.42■□□□□ 0.7
SSBP3-202ENST00000357475 PUS1Q9Y606 427 aaKnown RBP eCLIP19.42■□□□□ 0.7
SSBP3-202ENST00000357475 EDN2P20800 178 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 MYCNOSP40205 109 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 YPEL3P61236 119 aaPredicted RBP19.41■□□□□ 0.7
SSBP3-202ENST00000357475 KLF5Q13887 457 aaPredicted RBP19.41■□□□□ 0.7
SSBP3-202ENST00000357475 TOMM20LQ6UXN7 152 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 ARPC5LQ9BPX5 153 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 TOMM40O96008 361 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 ZP3P21754 424 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 ZNF600Q6ZNG1 722 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 RSG1Q9BU20 258 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 NPCDR1Q9BY65 106 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 ZFAND3Q9H8U3 227 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 SLC45A2Q9UMX9 530 aa19.41■□□□□ 0.7
SSBP3-202ENST00000357475 BCL2L11O43521 198 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms