RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 IGHV4OR15-8A0A075B7B6 117 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 A0A087WW49 117 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 RPS10-NUDT3A0A1W2PQS6 291 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 ZFP92A6NM28 416 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 FAM90A26D6RGX4 464 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 BMPR1BO00238 502 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 TSPAN15O95858 294 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 NPY1RP25929 384 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 FOXE3Q13461 319 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 C2orf83Q53S99 150 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 ZNF114Q8NC26 417 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 OR10P1Q8NGE3 313 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 ZNF502Q8TBZ5 544 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 DCUN1D4Q92564 292 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 SLC35E1Q96K37 410 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 TENM3Q9P273 2699 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 NUPL2O15504 423 aaKnown RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 EIF3GO75821 320 aaKnown RBP eCLIP3.09□□□□□ -1.92
LIG4-201ENST00000356922 OR2C1O95371 312 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 IGKV1-17P01599 117 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 GIPP09681 153 aaPredicted RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 LYL1P12980 280 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 CXCL2P19875 107 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 CDX1P47902 265 aaPredicted RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 SLURP1P55000 103 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 RIPPLY3P57055 190 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 RAB31Q13636 194 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 RPEL1Q2QD12 228 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 LAMTOR1Q6IAA8 161 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 ADAMTSL5Q6ZMM2 481 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 HSD17B13Q7Z5P4 300 aaPredicted RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 STPG3Q8N7X2 389 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 ZNF709Q8N972 641 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 OR11H1Q8NG94 326 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 NPIPB3Q92617 1050 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 RCC1LQ96I51 464 aaKnown RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 PBDC1Q9BVG4 233 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 SMIM3Q9BZL3 60 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 LYRM2Q9NU23 88 aaPredicted RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 U3KQ87 197 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 TSC22D2O75157 780 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 ELANEP08246 267 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 GPR183P32249 361 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 NPBWR1P48145 328 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 FLI1Q01543 452 aaPredicted RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 FGL1Q08830 312 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 BTN1A1Q13410 526 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 ZNF343Q6P1L6 599 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 ACOT7LQ6ZUV0 252 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 NECAP1Q8NC96 275 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 OR1L6Q8NGR2 347 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 NARS2Q96I59 477 aaKnown RBP3.09□□□□□ -1.92
LIG4-201ENST00000356922 UBE2E2Q96LR5 201 aa3.09□□□□□ -1.92
LIG4-201ENST00000356922 M0QZ24 198 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 IFNA5P01569 189 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 APOHP02749 345 aaPredicted RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 RND2P52198 227 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 HBG1P69891 147 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 HBG2P69892 147 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 EWSR1Q01844 656 aaKnown RBP eCLIP3.08□□□□□ -1.926e-11■■■■■ 40.6
LIG4-201ENST00000356922 CD69Q07108 199 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 CLINT1Q14677 625 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 LGALSLQ3ZCW2 172 aaPredicted RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 ETFRF1Q6IPR1 90 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 SCGB1C1Q8TD33 95 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 DLX4Q92988 240 aaPredicted RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 EEF1AKMT3Q96AZ1 226 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 TMEM68Q96MH6 324 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 RAB40CQ96S21 281 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 ZNF747Q9BV97 191 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 SLC25A31Q9H0C2 315 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 ARPC5O15511 151 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 BRI3O95415 125 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 LY86O95711 162 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 HIST1H1BP16401 226 aaKnown RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 PCP4P48539 62 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 TREML4Q6UXN2 200 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 IL34Q6ZMJ4 242 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 ZNF546Q86UE3 836 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 SRSF8Q9BRL6 282 aaKnown RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 PLA2G2EQ9NZK7 142 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 IGHV3OR16-13A0A075B7E8 117 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 IGHV3-74A0A0B4J1X5 117 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 ZNF207O43670 478 aaKnown RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 IGLC1P0CG04 106 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 RPL12P30050 165 aaKnown RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 MFAP4P55083 255 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 RAP2BP61225 183 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 BAXQ07812 192 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 EXOSC2Q13868 293 aaKnown RBP3.08□□□□□ -1.92
LIG4-201ENST00000356922 TIGITQ495A1 244 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 GCSAMLQ5JQS6 135 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 COMMD1Q8N668 190 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 TMEM116Q8NCL8 245 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 OR5C1Q8NGR4 320 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 CACNG8Q8WXS5 425 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 CXorf58Q96LI9 332 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 C21orf62Q9NYP8 219 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 MLXQ9UH92 298 aa3.08□□□□□ -1.92
LIG4-201ENST00000356922 TNFSF18Q9UNG2 199 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms