RNA–Protein interactions for RNA: ENST00000356770.8

PBRM1-203, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 7,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-203ENST00000356770 TRIOBPQ9H2D6 2365 aa6.94□□□□□ -1.3
PBRM1-203ENST00000356770 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 CITED1Q99966 193 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 LINC00527Q9UJ94 153 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 COL6A6A6NMZ7 2263 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 NCKAP5O14513 1909 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 A8MXK9 166 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 FOXL1Q12952 345 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 TMEM219Q86XT9 240 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 SLC22A18ASQ8N1D0 253 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 RNF125Q96EQ8 232 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 TRAV13-1A0A0B4J241 112 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 NPIPB13A6NJU9 1138 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 C15orf61A6NNL5 157 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 NPIPB5A8MRT5 1133 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 MMP23AO75900 390 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 DUTP33316 252 aaKnown RBP6.93□□□□□ -1.3
PBRM1-203ENST00000356770 FAM216BQ8N7L0 139 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 CECR9P0C854 216 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 COX5BP10606 129 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 ATP5G3P48201 142 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 C5orf47Q569G3 176 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 ASPHD2Q6ICH7 369 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 FAM166AQ6J272 317 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 Q96M66 194 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 C1QTNF4Q9BXJ3 329 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 F5H768 121 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 PEX11BO96011 259 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 IGHG3P01860 377 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 ZNF479Q96JC4 524 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
PBRM1-203ENST00000356770 LSM4Q9Y4Z0 139 aaKnown RBP6.93□□□□□ -1.3
PBRM1-203ENST00000356770 THBDP07204 575 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 RIPPLY2Q5TAB7 128 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 PVRIGQ6DKI7 326 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 PSG1P11464 419 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 RNF114Q9Y508 228 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 EP300Q09472 2414 aaPredicted RBP6.92□□□□□ -1.3
PBRM1-203ENST00000356770 CENPVL1A0A0U1RR11 272 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 TAL2Q16559 108 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 ZNF660Q6AZW8 331 aaPredicted RBP6.92□□□□□ -1.3
PBRM1-203ENST00000356770 DSCR8Q96T75 97 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 LINC00312Q9Y6C7 94 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 C17orf100A8MU93 164 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 PLA2G10O15496 165 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 PPBPP02775 128 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 ADMP35318 185 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 DSCR9P59020 149 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 SEC11AP67812 179 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 MRPL52Q86TS9 123 aaKnown RBP6.92□□□□□ -1.3
PBRM1-203ENST00000356770 CACNA1GO43497 2377 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 SHANK3Q9BYB0 1731 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 UCP1P25874 307 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 RASL11AQ6T310 242 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
PBRM1-203ENST00000356770 SCN4AP35499 1836 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 PKD1L3Q7Z443 1732 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 C17orf98A8MV24 154 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 BHLHA9Q7RTU4 235 aa6.92□□□□□ -1.3
PBRM1-203ENST00000356770 IGKV2-40A0A087WW87 121 aaPredicted RBP6.91□□□□□ -1.3
PBRM1-203ENST00000356770 IGKV2D-40P01614 121 aaPredicted RBP6.91□□□□□ -1.3
PBRM1-203ENST00000356770 NGFRP08138 427 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 MESP2Q0VG99 397 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 PSG8Q9UQ74 426 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 C5orf67F2Z3F1 127 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 GREB1Q4ZG55 1949 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 SLC25A45Q8N413 288 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 PRIMA1Q86XR5 153 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 IGHV2OR16-5A0A0B4J2B6 119 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 F8VVB4 439 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 F8VWA3 439 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 CCL3L1P16619 93 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 TNFRSF14Q92956 283 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 FCN3O75636 299 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 DAD1P61803 113 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 CFHR3Q02985 330 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 LAMTOR2Q9Y2Q5 125 aa6.91□□□□□ -1.3
PBRM1-203ENST00000356770 SRRM4A7MD48 611 aaKnown RBP6.9□□□□□ -1.3
PBRM1-203ENST00000356770 PRCDQ00LT1 54 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 DKK4Q9UBT3 224 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 XIRP1Q702N8 1843 aaKnown RBP6.9□□□□□ -1.3
PBRM1-203ENST00000356770 PTPRDP23468 1912 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 MYMXA0A1B0GTQ4 84 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 E9PQ18 207 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 GATA4P43694 442 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 RPL15P61313 204 aaKnown RBP6.9□□□□□ -1.3
PBRM1-203ENST00000356770 SPSB3Q6PJ21 355 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 FAM181AQ8N9Y4 354 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 PRDM13Q9H4Q3 707 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 SAP25Q8TEE9 199 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 RNF166Q96A37 237 aaPredicted RBP6.9□□□□□ -1.3
PBRM1-203ENST00000356770 TRPM7Q96QT4 1865 aa6.9□□□□□ -1.3
PBRM1-203ENST00000356770 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms