RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PPBPP02775 128 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 UMODP07911 640 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 RPL36AP83881 106 aaKnown RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 TEX38Q6PEX7 206 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 RPL36ALQ969Q0 106 aaKnown RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 CTSBP07858 339 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 FOXA3P55318 350 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 MIR17HGQ75NE6 70 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 RMI2Q96E14 147 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 TOMM40O96008 361 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 F12P00748 615 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 CCL3L1P16619 93 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 CBLN1P23435 193 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 KLHL30-AS1Q8NEE0 82 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 RCC1LQ96I51 464 aaKnown RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 IMMP1LQ96LU5 166 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 ANKRD36A6QL64 1941 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 NDUFS8O00217 210 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV2-26A0A0B4J1V2 119 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 A0A1B0GWB2 263 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 M0R1W7 72 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 RPL32P62910 135 aaKnown RBP4.6□□□□□ -1.67
PTPRD-202ENST00000356435 KIAA1644Q3SXP7 199 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 REPIN1Q9BWE0 567 aaKnown RBP4.6□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV1-18A0A0C4DH31 117 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 SIGLEC5O15389 551 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 ANKRD39Q53RE8 183 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 Q5PR19 223 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 MRPL14Q6P1L8 145 aaKnown RBP4.6□□□□□ -1.67
PTPRD-202ENST00000356435 USMG5Q96IX5 58 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 TRBV7-1A0A0A6YYK4 115 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM238C9JI98 176 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 F2Z2F3 143 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 GNG5P63218 68 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 ATOH7Q8N100 152 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 SCO2A0A1W2PP80 73 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 ATXN8Q156A1 80 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 RASL10AQ92737 203 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 SPANXDQ9BXN6 97 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 TANC1Q9C0D5 1861 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 PGPEP1LA6NFU8 196 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 HBDP02042 147 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 C15orf32Q32M92 178 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 MBD3L1Q8WWY6 194 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 RNF5Q99942 180 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 RLFQ13129 1914 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 SEC11AP67812 179 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 ERCC8Q13216 396 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 RSPO3Q9BXY4 272 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-202ENST00000356435 SPANXCQ9NY87 97 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 LDLRAD4O15165 306 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 LINC00271P0C7V0 271 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 TDRD6O60522 2096 aaKnown RBP4.6□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV1-46P01743 117 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 PLPPR1Q8TBJ4 325 aa4.6□□□□□ -1.67
PTPRD-202ENST00000356435 DPRXA6NFQ7 191 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 M0R2P5 195 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 TNFSF13O75888 250 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 GATA3P23771 443 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 ZNF497Q6ZNH5 498 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 WFIKKN1Q96NZ8 548 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 SPRR3Q9UBC9 169 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 TRBV24-1A0A075B6N3 115 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 NDUFS6O75380 124 aaKnown RBP4.59□□□□□ -1.67
PTPRD-202ENST00000356435 DPM2O94777 84 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 UCP1P25874 307 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 SS18Q15532 418 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 ZNF672Q499Z4 452 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-202ENST00000356435 LCN12Q6JVE5 192 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM144Q7Z5S9 345 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 TRAV8-4A0A0B4J246 113 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 MST1LQ2TV78 715 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 ACTL10Q5JWF8 245 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 C9orf139Q6ZV77 190 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 HIGD1CA8MV81 97 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 HEPN1Q6WQI6 88 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 TEX43Q6ZNM6 134 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 MBNL3Q9NUK0 354 aaKnown RBP4.59□□□□□ -1.67
PTPRD-202ENST00000356435 LAMTOR3Q9UHA4 124 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 PKIGQ9Y2B9 76 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 LINC01559Q495D7 138 aa4.59□□□□□ -1.67
PTPRD-202ENST00000356435 LINC00614P0C842 121 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 MORN2Q502X0 79 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 TMEM219Q86XT9 240 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 IGLV3-32A0A0A0MS00 114 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 H3BUX3 64 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 RAMP1O60894 148 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 IGFBP3P17936 291 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-202ENST00000356435 TPTE2P1Q5T6R2 138 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 SPAG8Q99932 426 aaPredicted RBP4.59□□□□□ -1.68
PTPRD-202ENST00000356435 ANAPC10Q9UM13 185 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 SPCS1Q9Y6A9 102 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 TRPM6Q9BX84 2022 aa4.59□□□□□ -1.68
PTPRD-202ENST00000356435 TRAV2A0A0B4J234 112 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 LYNX1G3V0Z9 82 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 CGB3P0DN86 165 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 LYNX1P0DP58 116 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 PSG1P11464 419 aa4.58□□□□□ -1.68
PTPRD-202ENST00000356435 CD59P13987 128 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms