RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CATR1Q13166 79 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 Q6AWC8 147 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
RTN3-205ENST00000356000 F11RQ9Y624 299 aaKnown RBP12.82□□□□□ -0.36
RTN3-205ENST00000356000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.81□□□□□ -0.36
RTN3-205ENST00000356000 A0A1B0GWB2 263 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 CELA2BP08218 269 aaPredicted RBP12.81□□□□□ -0.36
RTN3-205ENST00000356000 CFHR2P36980 270 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 TNFRSF4P43489 277 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 C7orf69Q9H7B7 122 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 AP5S1Q9NUS5 200 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 ESPL1Q14674 2120 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 ID1P41134 155 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 ERVK11-1P61568 191 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 ABHD17BQ5VST6 288 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 ZNF562Q6V9R5 426 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 WDR31Q8NA23 367 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 UBALD1Q8TB05 177 aa12.81□□□□□ -0.36
RTN3-205ENST00000356000 TCRBV4S1A1TA0A5B7 111 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 FAM90A9PA6NNJ1 464 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 PEAR1Q5VY43 1037 aaPredicted RBP12.8□□□□□ -0.36
RTN3-205ENST00000356000 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.8□□□□□ -0.36
RTN3-205ENST00000356000 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 THBDP07204 575 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 Q6ZS92 163 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 NHP2Q9NX24 153 aaKnown RBP12.8□□□□□ -0.36
RTN3-205ENST00000356000 CACNA1AO00555 2505 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 FAM186AA6NE01 2351 aa12.8□□□□□ -0.36
RTN3-205ENST00000356000 NMUP48645 174 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 TCTAP57738 103 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 TMEM133Q9H2Q1 129 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 ZNF32P17041 273 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 TMEM178AQ8NBL3 297 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 PRELID3AQ96N28 172 aa12.79□□□□□ -0.36
RTN3-205ENST00000356000 KIR2DS5A0A0G2JLQ3 304 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 A0A0G2JNG1 304 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 KIR2DS3K7RE56 304 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 APOHP02749 345 aaPredicted RBP12.78□□□□□ -0.36
RTN3-205ENST00000356000 CSN3P07498 182 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 KIR2DS5Q14953 304 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 PMS2CLQ68D20 193 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 RNF138Q8WVD3 245 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 A0A087WX48 190 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 PRSS29PA6NIE9 313 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 FAM90A27PA6NNH2 459 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 FGFBP3Q8TAT2 258 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 ARRDC1-AS1Q9H2J1 176 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 TMEM140Q9NV12 185 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
RTN3-205ENST00000356000 GAGE12JA6NER3 117 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 GAGE7O76087 117 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 GAGE12FP0CL80 117 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 GAGE12GP0CL81 117 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 GAGE12IP0CL82 117 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 CT45A10P0DMU9 189 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 GAGE4Q13068 117 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 ZNF808Q8N4W9 903 aaPredicted RBP12.77□□□□□ -0.36
RTN3-205ENST00000356000 TEX29Q8N6K0 151 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 OR8A1Q8NGG7 326 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 Q8TCH9 128 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 NABP2Q9BQ15 211 aa12.77□□□□□ -0.36
RTN3-205ENST00000356000 C16orf97H3BN30 126 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 PATE4P0C8F1 98 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 ZNF137PP52743 207 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 C3AR1Q16581 482 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.37
RTN3-205ENST00000356000 SPXQ9BT56 116 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 KLRF1Q9NZS2 232 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 POLDIP2Q9Y2S7 368 aa12.77□□□□□ -0.37
RTN3-205ENST00000356000 AMMECR1Q9Y4X0 333 aaPredicted RBP12.77□□□□□ -0.37
RTN3-205ENST00000356000 IGLV3-32A0A0A0MS00 114 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 CHEK1O14757 476 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 HHEXQ03014 270 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 ZNF497Q6ZNH5 498 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 Q6ZS52 159 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 CEND1Q8N111 149 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 ZNF488Q96MN9 340 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 MT-CO3P00414 261 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 CACNG7P62955 275 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
RTN3-205ENST00000356000 A0A096LNJ9 63 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 FABP5P3A8MUU1 101 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 CT83Q5H943 113 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 RPRMLQ8N4K4 120 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.75□□□□□ -0.37
RTN3-205ENST00000356000 PGLYRP4Q96LB8 373 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 RAB1BQ9H0U4 201 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 RPP21Q9H633 154 aaKnown RBP12.75□□□□□ -0.37
RTN3-205ENST00000356000 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
RTN3-205ENST00000356000 IGF2-ASQ6U949 168 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 PRSS22Q9GZN4 317 aa12.75□□□□□ -0.37
RTN3-205ENST00000356000 DNAH14Q0VDD8 3507 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms