RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TTC32Q5I0X7 151 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 JKAMPQ9P055 326 aa11.69□□□□□ -0.54
SREBF1-202ENST00000355815 DKK1O94907 266 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 TSPOP30536 169 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 FAM216BQ8N7L0 139 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 ONECUT1Q9UBC0 465 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 IGHV3OR16-8A0A075B7F1 116 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 ACP7Q6ZNF0 438 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 LINC00596Q86U02 117 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 VSTM2AQ8TAG5 236 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 GP6Q9HCN6 339 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 IGHV3OR16-13A0A075B7E8 117 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 IGHV3-74A0A0B4J1X5 117 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 PYYP10082 97 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 SPATA31B1PQ5VZV4 182 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 PCSK4Q6UW60 755 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 CSPG4Q6UVK1 2322 aa11.68□□□□□ -0.54
SREBF1-202ENST00000355815 MGST3O14880 152 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 PLA2G5P39877 138 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 EMP1P54849 157 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 FOXL2NBQ6ZUU3 175 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 TNFRSF1AP19438 455 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
SREBF1-202ENST00000355815 ACTL10Q5JWF8 245 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 KIR3DL3Q8N743 410 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
SREBF1-202ENST00000355815 ANKRD39Q53RE8 183 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 STPG4Q8N801 248 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 FGF23Q9GZV9 251 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-202ENST00000355815 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 IGHV2OR16-5A0A0B4J2B6 119 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 C10orf91Q5T1B1 145 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 WDR82Q6UXN9 313 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 RPRMLQ8N4K4 120 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 CHD8Q9HCK8 2581 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 SH2D7A6NKC9 451 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-202ENST00000355815 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 LINC00305Q7Z4B0 112 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 NCOR1P1Q9H4R4 102 aa11.66□□□□□ -0.54
SREBF1-202ENST00000355815 STAG3L2P0CL84 134 aa11.65□□□□□ -0.54
SREBF1-202ENST00000355815 CEACAM8P31997 349 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-202ENST00000355815 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
SREBF1-202ENST00000355815 SPTBN4Q9H254 2564 aa11.65□□□□□ -0.54
SREBF1-202ENST00000355815 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
SREBF1-202ENST00000355815 FCGR2BP31994 310 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-202ENST00000355815 ZNF497Q6ZNH5 498 aa11.65□□□□□ -0.54
SREBF1-202ENST00000355815 MRPL16Q9NX20 251 aaKnown RBP11.65□□□□□ -0.54
SREBF1-202ENST00000355815 A0A1W2PRE2 83 aa11.65□□□□□ -0.55
SREBF1-202ENST00000355815 GPX1P07203 203 aa11.65□□□□□ -0.55
SREBF1-202ENST00000355815 CACNG7P62955 275 aa11.65□□□□□ -0.55
SREBF1-202ENST00000355815 LRTM2Q8N967 370 aa11.65□□□□□ -0.55
SREBF1-202ENST00000355815 SIGMAR1Q99720 223 aa11.65□□□□□ -0.55
SREBF1-202ENST00000355815 MRPS18CQ9Y3D5 142 aaKnown RBP11.65□□□□□ -0.55
SREBF1-202ENST00000355815 NBEAP1P0C6P0 100 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 MYOD1P15172 320 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 TDRG1Q3Y452 100 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 CLEC7AQ9BXN2 247 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 ANKRD11Q6UB99 2663 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-202ENST00000355815 LOXL3P58215 753 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 PRSS8Q16651 343 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 Q6ZWC4 215 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
SREBF1-202ENST00000355815 AHRRA9YTQ3 701 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 C16orf97H3BN30 126 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 PEX7O00628 323 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 PPIHO43447 177 aaKnown RBP11.64□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF883P0CG24 379 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 ZNF257Q9Y2Q1 563 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 TMEM131Q92545 1883 aa11.64□□□□□ -0.55
SREBF1-202ENST00000355815 TRAV5A0A0B4J249 113 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 MLNRO43193 412 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 NRN1LQ496H8 165 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 A0A1W2PNU3 283 aaPredicted RBP11.63□□□□□ -0.55
SREBF1-202ENST00000355815 IZUMO1RA6ND01 250 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 IGLV3-1P01715 115 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 OCIAD2Q56VL3 154 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 SLC25A10Q9UBX3 287 aaPredicted RBP11.63□□□□□ -0.55
SREBF1-202ENST00000355815 RPL27AP46776 148 aaKnown RBP11.63□□□□□ -0.55
SREBF1-202ENST00000355815 EFNB3Q15768 340 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 COLCA1Q6ZS62 124 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 WDR86Q86TI4 376 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 C5orf30Q96GV9 206 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 PPIAL4EA0A075B759 164 aa11.63□□□□□ -0.55
SREBF1-202ENST00000355815 FOXH1O75593 365 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms