RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 RNASE4P34096 147 aaKnown RBP10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 HGFACQ04756 655 aa10.57□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 TRGV3P03979 118 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 SPSB3Q6PJ21 355 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 DMRTC2Q8IXT2 367 aaPredicted RBP10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 TNFRSF6BO95407 300 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 SMRP1Q8NCR6 262 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGHV3-66A0A0C4DH42 116 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 CECR9P0C854 216 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 ZNF837Q96EG3 531 aaPredicted RBP10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 C9JQL5 133 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 CD33P20138 364 aa10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 MRPS18CQ9Y3D5 142 aaKnown RBP10.56□□□□□ -0.72
SYNCRIP-201ENST00000355238 PFN1P07737 140 aaKnown RBP10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGKV3-20P01619 116 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 B9A039 149 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 S4R3C0 116 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 CCL21O00585 134 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 SLC25A20O43772 301 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 PPP1R27Q86WC6 154 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 PLEKHB2Q96CS7 222 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 CHAC1Q9BUX1 264 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
SYNCRIP-201ENST00000355238 ZNF831Q5JPB2 1677 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGKV1D-33P01593 117 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGKV1-33P01594 117 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 RSPO3Q9BXY4 272 aaPredicted RBP10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGHV3-49A0A0A0MS15 119 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 FAM231BA6NCW3 169 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 RFPL3SP0C7P2 107 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 RFNGQ9Y644 331 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 HEATR5BQ9P2D3 2071 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGLV3-32A0A0A0MS00 114 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 MMP23AO75900 390 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGLC2P0DOY2 106 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGLC3P0DOY3 106 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 CLEC2AQ6UVW9 174 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 PATE3B3GLJ2 98 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 MORN3Q6PF18 240 aaPredicted RBP10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 MESP1Q9BRJ9 268 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 NKX2-8O15522 239 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 CDKN1AP38936 164 aa10.54□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 ZNF562Q6V9R5 426 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 C9orf118A6NHY6 69 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 CRYGSP22914 178 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 QRFPP83859 136 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 PLSCR4Q9NRQ2 329 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 ATG2BQ96BY7 2078 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 TCRAP04437 139 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 KLF12Q9Y4X4 402 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 TAF1LQ8IZX4 1826 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 IGHV2OR16-5A0A0B4J2B6 119 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 A0A1B0GWJ7 208 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 CD28P10747 220 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 MAFAQ8NHW3 353 aaPredicted RBP10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 SPANXDQ9BXN6 97 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 SELENOKQ9Y6D0 94 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 DUX3Q96PT4 197 aa10.53□□□□□ -0.72
SYNCRIP-201ENST00000355238 CFPP27918 469 aa10.52□□□□□ -0.72
SYNCRIP-201ENST00000355238 SAP25Q8TEE9 199 aa10.52□□□□□ -0.72
SYNCRIP-201ENST00000355238 MLNRO43193 412 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 EFEMP2O95967 443 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 FOXH1O75593 365 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 GFRA4Q9GZZ7 299 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 PPP1R32Q7Z5V6 425 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 NBR2O15453 112 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 CD7P09564 240 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 LYZL1Q6UWQ5 148 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 CLEC19AQ6UXS0 136 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 FAM57AQ8TBR7 257 aa10.52□□□□□ -0.73
SYNCRIP-201ENST00000355238 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 BMPERQ8N8U9 685 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 Q6ZS49 121 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 F8W1H4 67 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 TIAF1O95411 115 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 NCR2O95944 276 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 FAM201AQ5SY85 155 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 RBBP6Q7Z6E9 1792 aaKnown RBP10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 K7EP13 123 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 PPIFP30405 207 aaKnown RBP10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 ATP6V0BQ99437 205 aa10.51□□□□□ -0.73
SYNCRIP-201ENST00000355238 PLXNB2O15031 1838 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms