RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TRBV9A0A0B4J1U6 114 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 A0A0U1RQK1 487 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 HMGB3O15347 200 aaKnown RBP13.54□□□□□ -0.24
VPS13B-201ENST00000355155 FABP1P07148 127 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
VPS13B-201ENST00000355155 AKIRIN2Q53H80 203 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 C19orf35Q6ZS72 473 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 TMEM242Q9NWH2 141 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 ZNF462Q96JM2 2506 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 YPEL4Q96NS1 127 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 HSPB9Q9BQS6 159 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 DOK5Q9P104 306 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 C11orf94C9JXX5 98 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 TOMM40O96008 361 aa13.54□□□□□ -0.24
VPS13B-201ENST00000355155 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
VPS13B-201ENST00000355155 IGKV1-17P01599 117 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 AMY1AP04745 511 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 GATA2P23769 480 aaPredicted RBP13.53□□□□□ -0.24
VPS13B-201ENST00000355155 C10orf113Q5VZT2 155 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 TCEAL7Q9BRU2 100 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 THYN1Q9P016 225 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 NAT8Q9UHE5 227 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 M0QZK8 103 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 IGHV4-31P0DP07 118 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 C15orf54Q8N8G6 183 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 MRPL27Q9P0M9 148 aaKnown RBP13.53□□□□□ -0.24
VPS13B-201ENST00000355155 FLNCQ14315 2725 aa13.53□□□□□ -0.24
VPS13B-201ENST00000355155 CXorf65A6NEN9 183 aa13.52□□□□□ -0.24
VPS13B-201ENST00000355155 COX7A2P2O60397 106 aa13.52□□□□□ -0.24
VPS13B-201ENST00000355155 EIF3GO75821 320 aaKnown RBP eCLIP13.52□□□□□ -0.24
VPS13B-201ENST00000355155 AVPP01185 164 aa13.52□□□□□ -0.24
VPS13B-201ENST00000355155 NPPCP23582 126 aa13.52□□□□□ -0.24
VPS13B-201ENST00000355155 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
VPS13B-201ENST00000355155 YTHDF2Q9Y5A9 579 aaKnown RBP13.52□□□□□ -0.25
VPS13B-201ENST00000355155 CR1P17927 2039 aa13.52□□□□□ -0.25
VPS13B-201ENST00000355155 ZNF343Q6P1L6 599 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 PRDM13Q9H4Q3 707 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 LY96Q9Y6Y9 160 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 IGF1P05019 195 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 COL8A1P27658 744 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 MFAP4P55083 255 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 OR4F5Q8NH21 305 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 OR4F4Q96R69 305 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 FAM103A1Q9BTL3 118 aaKnown RBP13.51□□□□□ -0.25
VPS13B-201ENST00000355155 PARLQ9H300 379 aa13.51□□□□□ -0.25
VPS13B-201ENST00000355155 OR2C1O95371 312 aa13.5□□□□□ -0.25
VPS13B-201ENST00000355155 TSPAN4O14817 238 aa13.5□□□□□ -0.25
VPS13B-201ENST00000355155 FOLR2P14207 255 aa13.5□□□□□ -0.25
VPS13B-201ENST00000355155 ATP5G3P48201 142 aa13.5□□□□□ -0.25
VPS13B-201ENST00000355155 PUS1Q9Y606 427 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS13B-201ENST00000355155 NAV3Q8IVL0 2385 aa13.5□□□□□ -0.25
VPS13B-201ENST00000355155 COLCA2A8K830 154 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 H3BUA1 57 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 HYPMO75409 117 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 APELAP0DMC3 54 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 Q5PR19 223 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 CBLN2Q8IUK8 224 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 SSX3Q99909 188 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 CTDSP1Q9GZU7 261 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 ZNF355PQ9NSJ1 428 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 PRELID1Q9Y255 219 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 ZNF727A8MUV8 499 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 MYCNOSP40205 109 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 MORN5Q5VZ52 161 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 RPS10P5Q9NQ39 176 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 PSG1P11464 419 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 BRD3OSQ6XYD6 125 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 FXYD5Q96DB9 178 aa13.49□□□□□ -0.25
VPS13B-201ENST00000355155 M0R036 132 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 IGHG2P01859 326 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 TIGITQ495A1 244 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 OR51G1Q8NGK1 321 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 SMIM7Q9BQ49 75 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 FBN2P35556 2912 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 PLXNB1O43157 2135 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 C9JCJ5 164 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 NDUFB8O95169 186 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
VPS13B-201ENST00000355155 RNF212Q495C1 297 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 LINC00305Q7Z4B0 112 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 RPUSD4Q96CM3 377 aaKnown RBP13.47□□□□□ -0.25
VPS13B-201ENST00000355155 UHRF2Q96PU4 802 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 OR51M1Q9H341 326 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 C21orf62Q9NYP8 219 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 PRRC2AP48634 2157 aaKnown RBP13.47□□□□□ -0.25
VPS13B-201ENST00000355155 GP9P14770 177 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 ZNF502Q8TBZ5 544 aa13.47□□□□□ -0.25
VPS13B-201ENST00000355155 GAR1Q9NY12 217 aaKnown RBP13.47□□□□□ -0.25
VPS13B-201ENST00000355155 H3BRN7 92 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 CD99P14209 185 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 RPL23P62829 140 aaKnown RBP13.46□□□□□ -0.25
VPS13B-201ENST00000355155 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms