RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 FAM90A10PA6NDY2 464 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 FAM90A20PA6NIJ5 464 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 FAM90A8PA6NJQ4 464 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 FAM90A13PP0C7W8 464 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 FAM90A24PP0C7X0 464 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BKO60814 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BJP06899 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 COL9A1P20849 921 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BOP23527 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BBP33778 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BDP58876 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BCP62807 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST2H2BEQ16778 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 MPV17L2Q567V2 206 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.77□□□□□ -1.33
SCN8A-201ENST00000354534 PRIMA1Q86XR5 153 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BHQ93079 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BNQ99877 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 HIST1H2BMQ99879 126 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 IGKV1D-33P01593 117 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 IGKV1-33P01594 117 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 IRF3Q14653 427 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 OR13A1Q8NGR1 328 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 SPANXCQ9NY87 97 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 IGHV1-69-2A0A0G2JMI3 117 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 PPBPP02775 128 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 OTORQ9NRC9 128 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 WBP1LQ9NX94 342 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 SMPXQ9UHP9 88 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 CLPSP04118 112 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 CEACAM1P13688 526 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 CRYBA4P53673 196 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 TINCRA0A1B0GVN0 87 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 SPANXDQ9BXN6 97 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 C21orf62Q9NYP8 219 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 CELA2BP08218 269 aaPredicted RBP6.77□□□□□ -1.33
SCN8A-201ENST00000354534 C1QL4Q86Z23 238 aa6.77□□□□□ -1.33
SCN8A-201ENST00000354534 SS18Q15532 418 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 STRCQ7RTU9 1775 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
SCN8A-201ENST00000354534 NANOS3P60323 173 aaKnown RBP6.76□□□□□ -1.33
SCN8A-201ENST00000354534 TMEM187Q14656 261 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 PLPPR1Q8TBJ4 325 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 DTX1Q86Y01 620 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 ZNF876PQ49A33 203 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 KLF17Q5JT82 389 aaPredicted RBP6.76□□□□□ -1.33
SCN8A-201ENST00000354534 CARHSP1Q9Y2V2 147 aaKnown RBP6.76□□□□□ -1.33
SCN8A-201ENST00000354534 ATP5J2P56134 94 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 AQP3Q92482 292 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 HLA-DQB1P01920 261 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 UCP1P25874 307 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 PEBP1P30086 187 aaKnown RBP6.76□□□□□ -1.33
SCN8A-201ENST00000354534 BHLHA9Q7RTU4 235 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 NKAPP1Q8N9T2 125 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 D6R8Y8 96 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 PGFP49763 221 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 RPL39P5Q59GN2 51 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 NDUFA2O43678 99 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 C1QAP02745 245 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 PSG4Q00888 419 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 SMIM20Q8N5G0 67 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 U3KQE9 123 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 OR9G9P0C7N8 305 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 RCHY1Q96PM5 261 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 MYO18BQ8IUG5 2567 aa6.76□□□□□ -1.33
SCN8A-201ENST00000354534 GATA2P23769 480 aaPredicted RBP6.75□□□□□ -1.33
SCN8A-201ENST00000354534 TAL2Q16559 108 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 WNK3Q9BYP7 1800 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 SP9P0CG40 484 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 RHOGP84095 191 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 UTF1Q5T230 341 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 DEFB105AQ8NG35 78 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 TIMM21Q9BVV7 248 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 CCL3P10147 92 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 C21orf140B9A014 251 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 TMEM243Q9BU79 118 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 CFHR5Q9BXR6 569 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 IFI27L2Q9H2X8 130 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 LILRA1O75019 489 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 LINC01465Q8N7H1 131 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 PARP14Q460N5 1801 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 A8MWP6 167 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 UPK3AO75631 287 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 PTGDSP41222 190 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 IFITM2Q01629 132 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 Q5BKY6 102 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 MYEOVQ96EZ4 313 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 WFDC6Q9BQY6 131 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 LHX9Q9NQ69 397 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 IGHV3-11P01762 117 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 KLRD1Q13241 179 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 ATRAIDQ6UW56 229 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms