RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SMIM17P0DL12 118 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 MTCP1P56278 107 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 RPS11P62280 158 aaKnown RBP eCLIP8.64□□□□□ -1.03
RTN3-204ENST00000354497 HLA-DRB3P79483 266 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 TOMM20LQ6UXN7 152 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 IZUMO1Q8IYV9 350 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 ZNF491Q8N8L2 437 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 RFESDQ8TAC1 157 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 OR4C12Q96R67 309 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 S1PR3Q99500 378 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 SPXQ9BT56 116 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 RETNQ9HD89 108 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
RTN3-204ENST00000354497 A0A1B0GU03 582 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 LINC01619G3V211 115 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 H0YIZ8 118 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 DEGS1O15121 323 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 ZNF19P17023 458 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 LGALS7P47929 136 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 LYPD6Q86Y78 171 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 OR13A1Q8NGR1 328 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 PTX4Q96A99 478 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 CIB3Q96Q77 187 aaPredicted RBP8.63□□□□□ -1.03
RTN3-204ENST00000354497 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 ELOVL1Q9BW60 279 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 SLC35D1Q9NTN3 355 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 BORCS7-ASMTA0A0B4J1R7 106 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 SLC33A1O00400 549 aaPredicted RBP8.63□□□□□ -1.03
RTN3-204ENST00000354497 MOSP00540 346 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 GZMHP20718 246 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 CCL1P22362 96 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 RUNX1Q01196 453 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 ZNF816Q0VGE8 651 aaPredicted RBP8.63□□□□□ -1.03
RTN3-204ENST00000354497 PMS2P11Q13670 270 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 EBI3Q14213 229 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 SLC35F2Q8IXU6 374 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 Q8N1Y9 231 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 Q8N6K4 173 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 TSEN15Q8WW01 171 aaKnown RBP8.63□□□□□ -1.03
RTN3-204ENST00000354497 C2orf50Q96LR7 162 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 GFI1Q99684 422 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 C20orf24Q9BUV8 137 aa8.63□□□□□ -1.03
RTN3-204ENST00000354497 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 G3V318 75 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 SCGB1D1O95968 90 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 SCGB1D2O95969 90 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 CSN2P05814 226 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 OR10J4P0C629 311 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 CTRLP40313 264 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 ELLP55199 621 aaPredicted RBP8.62□□□□□ -1.03
RTN3-204ENST00000354497 SLAQ13239 276 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 SAMD13Q5VXD3 122 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 RPL7L1Q6DKI1 246 aaKnown RBP8.62□□□□□ -1.03
RTN3-204ENST00000354497 FAAP20Q6NZ36 180 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 ACSM6Q6P461 480 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 STPG4Q8N801 248 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 OR10W1Q8NGF6 305 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 MYOZ3Q8TDC0 251 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 C4orf36Q96KX1 117 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 TBX5Q99593 518 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 VAMP8Q9BV40 100 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 NAT8Q9UHE5 227 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 MRM2Q9UI43 246 aaKnown RBP8.62□□□□□ -1.03
RTN3-204ENST00000354497 RAB22AQ9UL26 194 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 AK6Q9Y3D8 172 aaKnown RBP8.62□□□□□ -1.03
RTN3-204ENST00000354497 FRAS1Q86XX4 4008 aa8.62□□□□□ -1.03
RTN3-204ENST00000354497 IGHV4OR15-8A0A075B7B6 117 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 A0A087WW49 117 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 TRAV1-1A0A0B4J248 108 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 IGKV1-12A0A0C4DH73 117 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 ZNF736B4DX44 427 aaPredicted RBP8.61□□□□□ -1.03
RTN3-204ENST00000354497 IGKV1D-12P01611 117 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 CD3DP04234 171 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 IGF1P05019 195 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 REG1AP05451 166 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 PFN1P07737 140 aaKnown RBP8.61□□□□□ -1.03
RTN3-204ENST00000354497 ZNF20P17024 532 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 SSTR5P35346 364 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 RAB9AP51151 201 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 ACTL10Q5JWF8 245 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 Q6P435 159 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 Q6ZSR3 168 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 CHST4Q8NCG5 386 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 OR52M1Q8NGK5 317 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 PP6455Q8WZ26 134 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 LINC00476Q8WZB0 136 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 MRGPRFQ96AM1 343 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 SEC22AQ96IW7 307 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 DERL3Q96Q80 235 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 SPACA5Q96QH8 159 aa8.61□□□□□ -1.03
RTN3-204ENST00000354497 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
RTN3-204ENST00000354497 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
RTN3-204ENST00000354497 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms