RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SELLP14151 372 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 RPP21Q9H633 154 aaKnown RBP8.33□□□□□ -1.08
COL11A1-201ENST00000353414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.08
COL11A1-201ENST00000353414 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 H3BUX3 64 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 KLF17Q5JT82 389 aaPredicted RBP8.33□□□□□ -1.08
COL11A1-201ENST00000353414 DMRT1Q9Y5R6 373 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 COL6A6A6NMZ7 2263 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 Q0VFX4 171 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 ZNF525Q8N782 197 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 A0A1B0GUT8 65 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 NCR2O95944 276 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 PAX1P15863 534 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 CLPSL2Q6UWE3 100 aa8.33□□□□□ -1.08
COL11A1-201ENST00000353414 PARP14Q460N5 1801 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 IGHV1-18A0A0C4DH31 117 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 MYOD1P15172 320 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 HOXD3P31249 432 aaPredicted RBP8.32□□□□□ -1.08
COL11A1-201ENST00000353414 SMIM8Q96KF7 97 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 FOXL1Q12952 345 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 Q96MF0 132 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 MRPS18AQ9NVS2 196 aaKnown RBP8.32□□□□□ -1.08
COL11A1-201ENST00000353414 RPUSD1Q9UJJ7 312 aaKnown RBP8.32□□□□□ -1.08
COL11A1-201ENST00000353414 LRRK1Q38SD2 2015 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 NRXN2Q9P2S2 1712 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 H2BFSP57053 126 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
COL11A1-201ENST00000353414 PGPEP1LA6NFU8 196 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 NEUROG1Q92886 237 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
COL11A1-201ENST00000353414 PLPPR1Q8TBJ4 325 aa8.32□□□□□ -1.08
COL11A1-201ENST00000353414 CFHR1Q03591 330 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 MBD3L4A6NDZ8 208 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 MBD3L5A6NJ08 208 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 HOXA3O43365 443 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 F5H768 121 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 GCM2O75603 506 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 OCIAD2Q56VL3 154 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 PIP4P2Q8N4L2 257 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 SCRT1Q9BWW7 348 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 SPTBN1Q01082 2364 aaKnown RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 TRAV13-1A0A0B4J241 112 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 CCL1P22362 96 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 ZNF660Q6AZW8 331 aaPredicted RBP8.31□□□□□ -1.08
COL11A1-201ENST00000353414 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 MED12Q93074 2177 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 PIN1P1O15428 100 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 GBF1Q92538 1859 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 SLC25A38Q96DW6 304 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 A0A087WWL8 130 aa8.31□□□□□ -1.08
COL11A1-201ENST00000353414 TRBV5-5A0A0J9YX44 114 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 FSTP19883 344 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 SPTA1P02549 2419 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 TM4SF5O14894 197 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 UCP3P55916 312 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 C15orf32Q32M92 178 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 SP5Q6BEB4 398 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-201ENST00000353414 C5orf24Q7Z6I8 188 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 TRAV41A0A0B4J266 112 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 GZMMP51124 257 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 C2orf68Q2NKX9 166 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 SIGMAR1Q99720 223 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 TMEM133Q9H2Q1 129 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-201ENST00000353414 DOCK4Q8N1I0 1966 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 NYNRINQ9P2P1 1898 aaKnown RBP8.3□□□□□ -1.08
COL11A1-201ENST00000353414 ZNF672Q499Z4 452 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-201ENST00000353414 ORMDL3Q8N138 153 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 PLXND1Q9Y4D7 1925 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 ADMP35318 185 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 SAXO1Q8IYX7 474 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 KNCNA6PVL3 124 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 F8VVB4 439 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 F8VWA3 439 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 TOMM40O96008 361 aa8.3□□□□□ -1.08
COL11A1-201ENST00000353414 PRR30Q53SZ7 412 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-201ENST00000353414 GGTLC3B5MD39 225 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 ZNF345Q14585 488 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 LINC00518Q8N0U6 118 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 POC1AQ8NBT0 407 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 FGFBP3Q8TAT2 258 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 C1orf159Q96HA4 380 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 PRB2P02812 416 aaPredicted RBP8.29□□□□□ -1.08
COL11A1-201ENST00000353414 ZNF876PQ49A33 203 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 HIST1H2BAQ96A08 127 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 PPP1R3EQ9H7J1 279 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 IL36BQ9NZH7 164 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 A0A087WV48 116 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 IRF3Q14653 427 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 ZNF114Q8NC26 417 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 PTPRDP23468 1912 aa8.29□□□□□ -1.08
COL11A1-201ENST00000353414 MYLKQ15746 1914 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms