RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CEBPGP53567 150 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 ATP5J2P56134 94 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 LGALS4P56470 323 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 GNB1P62873 340 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 CX3CL1P78423 397 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 ZNF90Q03938 601 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 FXYD3Q14802 87 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 PLGLAQ15195 96 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 TMEM241Q24JQ0 296 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 AKIRIN2Q53H80 203 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 ASPHD1Q5U4P2 390 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 FAM78BQ5VT40 261 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 PATE2Q6UY27 113 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 C19orf35Q6ZS72 473 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 Q8N9W7 124 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 OR1L6Q8NGR2 347 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 OR4X1Q8NH49 305 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 MISP3Q96FF7 219 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 SMIM7Q9BQ49 75 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 WNT10AQ9GZT5 417 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 DNAJC4Q9NNZ3 241 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 TMEM167BQ9NRX6 74 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 TNFRSF19Q9NS68 423 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 DOK5Q9P104 306 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 YTHDF2Q9Y5A9 579 aaKnown RBP5.48□□□□□ -1.53
TRIM55-203ENST00000350034 STAB1Q9NY15 2570 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 IGHV4-30-2A0A087WSY4 118 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 ELOA3CA0A087WX78 387 aaPredicted RBP5.47□□□□□ -1.53
TRIM55-203ENST00000350034 CENPVL3A0A0U1RRI6 287 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 OR2C1O95371 312 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 IGHV3-48P01763 117 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 IGLC1P0CG04 106 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 FAM106CPP0CH98 169 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 EGR2P11161 476 aaPredicted RBP5.47□□□□□ -1.53
TRIM55-203ENST00000350034 TMEM11P17152 192 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 BRS3P32247 399 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 SAA4P35542 130 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 DSCR9P59020 149 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 TAS2R45P59539 299 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 UBE2G2P60604 165 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 RPL23P62829 140 aaKnown RBP5.47□□□□□ -1.53
TRIM55-203ENST00000350034 NDPQ00604 133 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 FLI1Q01543 452 aaPredicted RBP5.47□□□□□ -1.53
TRIM55-203ENST00000350034 HES1Q14469 280 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 FAM120AOSQ5T036 256 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 MORN5Q5VZ52 161 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 CST9LP1Q5W188 147 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 CLEC2AQ6UVW9 174 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 IQCF2Q8IXL9 164 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 TTC9CQ8N5M4 171 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 OR51G1Q8NGK1 321 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 OR1L4Q8NGR5 311 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 ISOC2Q96AB3 205 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 RPUSD4Q96CM3 377 aaKnown RBP5.47□□□□□ -1.53
TRIM55-203ENST00000350034 FANCD2OSQ96PS1 177 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 PFDN5Q99471 154 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 SLC25A2Q9BXI2 301 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 CTDSP1Q9GZU7 261 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 C1RLQ9NZP8 487 aa5.47□□□□□ -1.53
TRIM55-203ENST00000350034 CRYBG3Q68DQ2 2970 aa5.46□□□□□ -1.53
TRIM55-203ENST00000350034 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.53
TRIM55-203ENST00000350034 IGLV11-55A0A075B6I3 123 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 A0A096LNT2 108 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 IGHV7-81A0A0B4J1V7 117 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 IGHV1-69DA0A0B4J2H0 117 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 A0A1W2PRE2 83 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 NDUFB4O95168 129 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 CNIH1O95406 144 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 IGKV1-17P01599 117 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 IGHV1-69P01742 117 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 HLA-DRB1P01911 266 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 APELAP0DMC3 54 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 COX6B1P14854 86 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 RAB5AP20339 215 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 BPIFB3P59826 476 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 ELOBQ15370 118 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 C10orf113Q5VZT2 155 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 FAM24BQ8N5W8 94 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 C22orf15Q8WYQ4 148 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 ARPC1AQ92747 370 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF48Q96MX3 618 aaPredicted RBP5.46□□□□□ -1.54
TRIM55-203ENST00000350034 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF355PQ9NSJ1 428 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 PRELID1Q9Y255 219 aa5.46□□□□□ -1.54
TRIM55-203ENST00000350034 TRBV20OR9-2A0A075B6H5 130 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 TRAV5A0A0B4J249 113 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 SCO2A0A1W2PP80 73 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 C9JCJ5 164 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 CLDN34H7C241 214 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 COX7A2P2O60397 106 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 PFN1P07737 140 aaKnown RBP5.45□□□□□ -1.54
TRIM55-203ENST00000350034 CD99P14209 185 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 MYCNOSP40205 109 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 KIAA0141Q14154 515 aaPredicted RBP5.45□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF674Q2M3X9 581 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 ZNF343Q6P1L6 599 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 LINC01551Q86U37 167 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 C1QL4Q86Z23 238 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 PIFOQ8TCI5 191 aa5.45□□□□□ -1.54
TRIM55-203ENST00000350034 Q8WTZ3 238 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms