RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ZNF799Q96GE5 643 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 OXGR1Q96P68 337 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 Q9H3A6 140 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 WFDC1Q9HC57 220 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 SYNGR2O43760 224 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 MPZL1O95297 269 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 CA7P43166 264 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 FMODQ06828 376 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 CD226Q15762 336 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 RPEQ96AT9 228 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 OR4C12Q96R67 309 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 IGSF23A1L1A6 192 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 IAPPP10997 89 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 EDDM3AQ14507 147 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 MMDQ15546 238 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 DEFB115Q30KQ5 88 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 TMEM106BQ9NUM4 274 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 FAM30AQ9NZY2 134 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 ZNF106Q9H2Y7 1883 aaKnown RBP4.88□□□□□ -1.63
RFC1-201ENST00000349703 IGHV1OR21-1A0A087WYE8 117 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 A0A1W2PS18 150 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 GRIFINA4D1Z8 144 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 PPBPP02775 128 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 CD59P13987 128 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 IGFBP2P18065 325 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 RUNX1Q01196 453 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 DEFB132Q7Z7B7 95 aa4.88□□□□□ -1.63
RFC1-201ENST00000349703 TINCRA0A1B0GVN0 87 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 YPEL3P61236 119 aaPredicted RBP4.87□□□□□ -1.63
RFC1-201ENST00000349703 TIGITQ495A1 244 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 PIFOQ8TCI5 191 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 CACNG8Q8WXS5 425 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 NRTNQ99748 197 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 A0A0B4J2C4 111 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 SS18L1O75177 396 aaPredicted RBP4.87□□□□□ -1.63
RFC1-201ENST00000349703 INSP01308 110 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 SMIM21Q3B7S5 101 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 Q6ZS52 159 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 APRG1Q8IVJ8 170 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 ABHD3Q8WU67 409 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 NAT8BQ9UHF3 227 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 IGHV4-61A0A0C4DH41 118 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 ZNF253O75346 499 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 IGHV4-59P01825 116 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 SLC25A6P12236 298 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 OR51H1Q8NH63 302 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 PAPPA2Q9BXP8 1791 aa4.87□□□□□ -1.63
RFC1-201ENST00000349703 IGLV1-44P01699 117 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 HLA-DRB1P01911 266 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 QRFPP83859 136 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 IL15RAQ13261 267 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 TMEM219Q86XT9 240 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 SGMS2Q8NHU3 365 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 SFXN3Q9BWM7 321 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 WDR61Q9GZS3 305 aaKnown RBP4.86□□□□□ -1.63
RFC1-201ENST00000349703 KIR2DL5BA0A0G2JN68 375 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 KIR2DL5BA0A0G2JPC4 375 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 IGHV4-38-2P0DP08 117 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 NMUP48645 174 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 CCL20P78556 96 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 S100A7L2Q5SY68 101 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 PRSS41Q7RTY9 318 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 KIR2DL5AQ8N109 375 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 OR2M7Q8NG81 312 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 J3KT08 172 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 ADAMTSL5Q6ZMM2 481 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 C9orf139Q6ZV77 190 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 GGNQ86UU5 652 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 LINC00527Q9UJ94 153 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 CASP8AP2Q9UKL3 1982 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 A0A0G2JLM5 398 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 FAM90A10PA6NDY2 464 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 RPL37AP8A6NKH3 93 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 MGST1P10620 155 aaKnown RBP4.86□□□□□ -1.63
RFC1-201ENST00000349703 IGLV3-21P80748 117 aaPredicted RBP4.86□□□□□ -1.63
RFC1-201ENST00000349703 PLGLB1Q02325 96 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
RFC1-201ENST00000349703 C16orf74Q96GX8 76 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 TMEM56-RWDD3S4R434 201 aa4.86□□□□□ -1.63
RFC1-201ENST00000349703 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.85□□□□□ -1.63
RFC1-201ENST00000349703 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 IFITM10A6NMD0 228 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 Q6ZVH6 145 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 OR5AS1Q8N127 324 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 SSBP3Q9BWW4 388 aaPredicted RBP4.85□□□□□ -1.63
RFC1-201ENST00000349703 ARL2-SNX15V9GYD0 113 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 NUMA1Q14980 2115 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 IGKV3D-20A0A0C4DH25 116 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 GAPTQ8N292 157 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 TAF15Q92804 592 aaKnown RBP eCLIP4.85□□□□□ -1.63
RFC1-201ENST00000349703 TMEM191AQ9H0A3 160 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 MS4A6AQ9H2W1 248 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 DOCK6Q96HP0 2047 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 OR2T8A6NH00 312 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 RER1O15258 196 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 NPIPB7O75200 414 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 IGF1P05019 195 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 RTL8BQ17RB0 113 aa4.85□□□□□ -1.63
RFC1-201ENST00000349703 LRRC75BQ2VPJ9 315 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms