RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 OSTCQ9NRP0 149 aa9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 PGPA6NDG6 321 aa9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 BSPH1Q075Z2 132 aa9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 PCSK4Q6UW60 755 aa9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 CENPVQ7Z7K6 275 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 OR5P3Q8WZ94 311 aa9.28□□□□□ -0.92
SMARCE1-202ENST00000348513 ASXL3Q9C0F0 2248 aa9.27□□□□□ -0.92
SMARCE1-202ENST00000348513 CECR9P0C854 216 aa9.27□□□□□ -0.92
SMARCE1-202ENST00000348513 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.92
SMARCE1-202ENST00000348513 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.92
SMARCE1-202ENST00000348513 C1orf100Q5SVJ3 147 aa9.27□□□□□ -0.92
SMARCE1-202ENST00000348513 IGHMP01871 453 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 KLRD1Q13241 179 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 CLEC7AQ9BXN2 247 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 IGHV3-66A0A0C4DH42 116 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 ATP5G2Q06055 141 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 ANKRD29Q8N6D5 301 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 SMPXQ9UHP9 88 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 SPTBP11277 2137 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 M0QXV9 152 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 CELA3BP08861 270 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 C2orf83Q53S99 150 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 TRAV24A0A0B4J272 114 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 VDAC2P45880 294 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 RPP21Q9H633 154 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 PNRC2Q9NPJ4 139 aaKnown RBP9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 CCDC88CQ9P219 2028 aa9.27□□□□□ -0.93
SMARCE1-202ENST00000348513 B9A039 149 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 TMEM170BQ5T4T1 132 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 C1QL2Q7Z5L3 287 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 OR9G1Q8NH87 305 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 ICE1Q9Y2F5 2266 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 IGHV3-49A0A0A0MS15 119 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 TIMP3P35625 211 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 KLF17Q5JT82 389 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 NPCDR1Q9BY65 106 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 ASIPP42127 132 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 PRSS8Q16651 343 aa9.26□□□□□ -0.93
SMARCE1-202ENST00000348513 MDC1Q14676 2089 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 C10orf128Q5T292 105 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 SRSF12Q8WXF0 261 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 VGLL1Q99990 258 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 JPT1Q9UK76 154 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 ABCA7Q8IZY2 2146 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 ARID2Q68CP9 1835 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A10PA6NDY2 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A18PA6NE21 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A16PA6NEW6 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A20PA6NIJ5 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A8PA6NJQ4 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A7PA6NKC0 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A22PA8MWA6 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A12PA8MX19 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A5PA8MXJ8 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A23PA8MXZ1 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 IFNL4K9M1U5 179 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 MOSP00540 346 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A15PP0C7V4 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A13PP0C7W8 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A14PP0C7W9 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM90A24PP0C7X0 464 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 COX8AP10176 69 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 IGLL1P15814 213 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 LEPP41159 167 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 SAXO1Q8IYX7 474 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM216BQ8N7L0 139 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 C9JAW5 83 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 DRAM1Q8N682 238 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 LYL1P12980 280 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 PTGDSP41222 190 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 IGHV1-2P23083 117 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 LY6DQ14210 128 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 OTOFQ9HC10 1997 aa9.25□□□□□ -0.93
SMARCE1-202ENST00000348513 MTCL1Q9Y4B5 1905 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 CX3CL1P78423 397 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 FAM106AQ4KMX7 169 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 C9orf106Q8NAJ2 232 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 DDB2Q92466 427 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 UBE2L6O14933 153 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 C18orf12Q96KH6 178 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 CACNA1IQ9P0X4 2223 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 HIGD1CA8MV81 97 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 PF4P02776 101 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 CD55P08174 381 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 SRSF7Q16629 238 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 PDCD11Q14690 1871 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 A0A1B0GUS0 222 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 ZNF883P0CG24 379 aa9.24□□□□□ -0.93
SMARCE1-202ENST00000348513 CSRP3P50461 194 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms