RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 C18orf15Q96N68 181 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 DUX3Q96PT4 197 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 MEGF9Q9H1U4 602 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 TMEM262E9PQX1 116 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 GNG5P63218 68 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 A6NNC1 897 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 LDLRAD4O15165 306 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 PYYP10082 97 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 CD177Q8N6Q3 437 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 GEMIN7Q9H840 131 aaKnown RBP15.4■□□□□ 0.06
UBE3C-201ENST00000348165 A0A1B0GUT8 65 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 EFNA4P52798 201 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 PRCDQ00LT1 54 aa15.4■□□□□ 0.06
UBE3C-201ENST00000348165 TMEM200BQ69YZ2 307 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 IL36BQ9NZH7 164 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 MLNRO43193 412 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 SRSF3P84103 164 aaKnown RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 KIR3DL3Q8N743 410 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 PRDM13Q9H4Q3 707 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 TMEM178BH3BS89 294 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 LY6HO94772 140 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 RNASE4P34096 147 aaKnown RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 ARTNQ5T4W7 220 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 HEPN1Q6WQI6 88 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 MBD3L4A6NDZ8 208 aaPredicted RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 MBD3L3A6NE82 208 aaPredicted RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 MBD3L5A6NJ08 208 aaPredicted RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 CA1P00915 261 aaPredicted RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 GCSAMLQ5JQS6 135 aa15.39■□□□□ 0.05
UBE3C-201ENST00000348165 MBD3L2Q8NHZ7 208 aaPredicted RBP15.39■□□□□ 0.05
UBE3C-201ENST00000348165 IGHV2-26A0A0B4J1V2 119 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
UBE3C-201ENST00000348165 PRELID3AQ96N28 172 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 MOB4Q9Y3A3 225 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 VDAC2P45880 294 aaPredicted RBP15.38■□□□□ 0.05
UBE3C-201ENST00000348165 KLRD1Q13241 179 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 ST6GALNAC6Q969X2 333 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 COLCA2A8K830 154 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 LGALS3P17931 250 aaKnown RBP15.38■□□□□ 0.05
UBE3C-201ENST00000348165 ZNF474Q6S9Z5 364 aaPredicted RBP15.38■□□□□ 0.05
UBE3C-201ENST00000348165 HIST1H2BLQ99880 126 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 C2orf88Q9BSF0 95 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 JKAMPQ9P055 326 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 LINC01587Q99440 93 aa15.38■□□□□ 0.05
UBE3C-201ENST00000348165 NPFFO15130 113 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 TMEM219Q86XT9 240 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 SIGMAR1Q99720 223 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 TNFRSF18Q9Y5U5 241 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 C1QTNF9BB2RNN3 333 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 IGHV1-8P0DP01 117 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 FMC1Q96HJ9 113 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 RPP21Q9H633 154 aaKnown RBP15.37■□□□□ 0.05
UBE3C-201ENST00000348165 FAM71F2Q6NXP2 309 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 MBD3L1Q8WWY6 194 aa15.37■□□□□ 0.05
UBE3C-201ENST00000348165 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 IGHG3P01860 377 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 MEIG1Q5JSS6 88 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 CIARTQ8N365 385 aaPredicted RBP15.36■□□□□ 0.05
UBE3C-201ENST00000348165 SDF2L1Q9HCN8 221 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 TCRBV4S1A1TA0A5B7 111 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 SUMO2P61956 95 aaKnown RBP15.36■□□□□ 0.05
UBE3C-201ENST00000348165 ADIPOQQ15848 244 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 PVRIGQ6DKI7 326 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 LHFPL4Q7Z7J7 247 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 LRTM2Q8N967 370 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 TMEM170AQ8WVE7 144 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 RNASE7Q9H1E1 156 aaKnown RBP15.36■□□□□ 0.05
UBE3C-201ENST00000348165 WNT2P09544 360 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 HTN3P15516 51 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 MPZP25189 248 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 LHFPL1Q86WI0 220 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 HIST3H2BBQ8N257 126 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 TNFRSF14Q92956 283 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 SELENOKQ9Y6D0 94 aa15.36■□□□□ 0.05
UBE3C-201ENST00000348165 MYOD1P15172 320 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 ZNF581Q9P0T4 197 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 NAPSAO96009 420 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 NUDT10Q8NFP7 164 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 TMEM160Q9NX00 188 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 PEMTQ9UBM1 199 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 DOCK9Q9BZ29 2069 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 LRRK1Q38SD2 2015 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 FER1L6-AS1Q8NA97 138 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 WDR83OSQ9Y284 106 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 NEUROG1Q92886 237 aa15.35■□□□□ 0.05
UBE3C-201ENST00000348165 PTPRQQ9UMZ3 2332 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 TSPAN13O95857 204 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 PAPPA-AS1Q5QFB9 102 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 BRD3OSQ6XYD6 125 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 WFDC1Q9HC57 220 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 FNDC1Q4ZHG4 1894 aaPredicted RBP15.34■□□□□ 0.05
UBE3C-201ENST00000348165 H3BUT2 72 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 FGF16O43320 207 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 APOHP02749 345 aaPredicted RBP15.34■□□□□ 0.05
UBE3C-201ENST00000348165 RPL23P62829 140 aaKnown RBP15.34■□□□□ 0.05
UBE3C-201ENST00000348165 TMEM170BQ5T4T1 132 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 BEND2Q8NDZ0 799 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 DPH3Q96FX2 82 aa15.34■□□□□ 0.05
UBE3C-201ENST00000348165 HIGD1CA8MV81 97 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms