RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 IL36BQ9NZH7 164 aa4.84□□□□□ -1.64
CLCN3-201ENST00000347613 HELTA6NFD8 242 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 OVOL3O00110 214 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 ISLRO14498 428 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PKIAP61925 76 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 C3orf36Q3SXR2 165 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 OR1L6Q8NGR2 347 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 GNB4Q9HAV0 340 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 CBLN4Q9NTU7 201 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 S4R3C0 116 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 FBN2P35556 2912 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PPIAL4EA0A075B759 164 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 IGLC7A0M8Q6 106 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PPIAL4DF5H284 164 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PPIAL4FP0DN26 164 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 CD99P14209 185 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 KIR2DS2P43631 304 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
CLCN3-201ENST00000347613 LCN2P80188 198 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 DEFA6Q01524 100 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 SLAQ13239 276 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 IQCJQ1A5X6 159 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM177Q53S58 311 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 MRPL54Q6P161 138 aaKnown RBP4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PNKDQ8N490 385 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 FXYD5Q96DB9 178 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 C7orf69Q9H7B7 122 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF355PQ9NSJ1 428 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PPIAL4AQ9Y536 164 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 MDFIC2A0A1B0GVS7 189 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 hADV38S2A0JD32 116 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 IGHV1-8P0DP01 117 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 GPR6P46095 362 aaPredicted RBP4.83□□□□□ -1.64
CLCN3-201ENST00000347613 MZT1Q08AG7 82 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 TPTE2P1Q5T6R2 138 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM108Q6UXF1 575 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM136Q6ZRR5 245 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 REC114Q7Z4M0 266 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 SPATA12Q7Z6I5 190 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 MRPL41Q8IXM3 137 aaKnown RBP4.83□□□□□ -1.64
CLCN3-201ENST00000347613 C1orf174Q8IYL3 243 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 OR5AU1Q8NGC0 362 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 FLYWCH2Q96CP2 140 aaKnown RBP4.83□□□□□ -1.64
CLCN3-201ENST00000347613 C17orf77Q96MU5 243 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 SNHG12Q9BXW3 62 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 FBXL7Q9UJT9 491 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 PRNDQ9UKY0 176 aa4.83□□□□□ -1.64
CLCN3-201ENST00000347613 WNK2Q9Y3S1 2297 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 SPTBN1Q01082 2364 aaKnown RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 SNURFLB1AK76 121 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 MKRN2OSH3BPM6 223 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 SELENOTP62341 195 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF329Q86UD4 541 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 FAM19A2Q8N3H0 131 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 OR1L8Q8NGR8 309 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 SSBP4Q9BWG4 385 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF835Q9Y2P0 537 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 PIEZO1Q92508 2521 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 GCGP01275 180 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 CRYGBP07316 175 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 MYCNOSP40205 109 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 TBR1Q16650 682 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM155Q4W5P6 130 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 SHISA2Q6UWI4 295 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 GFRALQ6UXV0 394 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 SPACA3Q8IXA5 215 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 TECRQ9NZ01 308 aaKnown RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 CENPEQ02224 2701 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 MXRA5Q9NR99 2828 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 TRAV8-1A0A0A6YYK1 113 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 C9JCJ5 164 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 M0QZ24 198 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 BMPR1BO00238 502 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 ENSAO43768 121 aaKnown RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 LIPFP07098 398 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 MGST1P10620 155 aaKnown RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 GNG4P50150 75 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 RANP62826 216 aaKnown RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 RTL8BQ17RB0 113 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 KLF17Q5JT82 389 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 KCNIP4Q6PIL6 250 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 OR10X1Q8NGY0 326 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 TMEM167AQ8TBQ9 72 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 ZNF596Q8TC21 504 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 BLNKQ8WV28 456 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 MBD6Q96DN6 1003 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 URB1-AS1Q96HZ7 61 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 FAM103A1Q9BTL3 118 aaKnown RBP4.82□□□□□ -1.64
CLCN3-201ENST00000347613 ENY2Q9NPA8 101 aa4.82□□□□□ -1.64
CLCN3-201ENST00000347613 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.81□□□□□ -1.64
CLCN3-201ENST00000347613 A0A1W2PPR1 153 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 TEX22C9J3V5 150 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 TOX4O94842 621 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 SCGB1D1O95968 90 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 IGLV1-47P01700 117 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 ORM2P19652 201 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 PPOXP50336 477 aa4.81□□□□□ -1.64
CLCN3-201ENST00000347613 LINC00305Q7Z4B0 112 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms