RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ID3Q02535 119 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST3H3Q16695 136 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF585BQ52M93 769 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 YPEL1O60688 119 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 CBLN1P23435 193 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 CRYBB3P26998 211 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 YPEL2Q96QA6 119 aa9□□□□□ -0.97
CLCN6-202ENST00000346436 A0A087WX48 190 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 C5orf52A6NGY3 159 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 TCTAP57738 103 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 LINC00205P59089 165 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 SRSF9Q13242 221 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 ASCL4Q6XD76 172 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 ZCCHC24Q8N2G6 241 aaKnown RBP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 RRHO14718 337 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF688P0C7X2 276 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 WDR82Q6UXN9 313 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 PSMG3Q9BT73 122 aaPredicted RBP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 RPUSD1Q9UJJ7 312 aaKnown RBP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF407Q9C0G0 2248 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 UBE2CO00762 179 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 ADIPOQQ15848 244 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 ZNF324BQ6AW86 544 aaPredicted RBP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 IFI27L2Q9H2X8 130 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 COL6A6A6NMZ7 2263 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 A0A0G2JRQ6 117 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 TPTE2P1Q5T6R2 138 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 HEPN1Q6WQI6 88 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 OBSL1O75147 1896 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 CFPP27918 469 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 CKS2P33552 79 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 MAP1LC3CQ9BXW4 147 aa8.99□□□□□ -0.97
CLCN6-202ENST00000346436 MRPL18Q9H0U6 180 aaKnown RBP8.99□□□□□ -0.97
CLCN6-202ENST00000346436 CA2P00918 260 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 AMY1AP04745 511 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 CYP2G1PQ6ZSU1 146 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 TRAV9-2A0A087WT02 112 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 FOSL1P15407 271 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 GATA2P23769 480 aaPredicted RBP8.98□□□□□ -0.97
CLCN6-202ENST00000346436 TCF23Q7RTU1 214 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.98□□□□□ -0.97
CLCN6-202ENST00000346436 IGHV2-26A0A0B4J1V2 119 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 SCO2A0A1W2PP80 73 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 C2orf83Q53S99 150 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 OR5AN1Q8NGI8 311 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 IGHV3-66A0A0C4DH42 116 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 LMO1P25800 156 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 MFAP2P55001 183 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 LRTM2Q8N967 370 aa8.98□□□□□ -0.97
CLCN6-202ENST00000346436 DIRC3C9JPN6 131 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 H3BRM9 83 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 OVOL1O14753 267 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 APCSP02743 223 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 RPL23P62829 140 aaKnown RBP8.97□□□□□ -0.97
CLCN6-202ENST00000346436 TCF24Q7RTU0 167 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 TMEM183AQ8IXX5 376 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 ATOH7Q8N100 152 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 SFRP2Q96HF1 295 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 PRDM13Q9H4Q3 707 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 NMUP48645 174 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 KIAA1549LQ6ZVL6 1849 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 GPX4P36969 197 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-202ENST00000346436 NUDT10Q8NFP7 164 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 SPOCK3Q9BQ16 436 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 FAM223BA6NKX1 122 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 NUDT3O95989 172 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 AMBPP02760 352 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 COX6CP09669 75 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 FAM223AQ8IWN6 122 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 BEND2Q8NDZ0 799 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 RMI2Q96E14 147 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 PRB1P04280 392 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 LYL1P12980 280 aa8.97□□□□□ -0.97
CLCN6-202ENST00000346436 GSX1Q9H4S2 264 aaPredicted RBP8.97□□□□□ -0.97
CLCN6-202ENST00000346436 CGAP01215 116 aa8.96□□□□□ -0.97
CLCN6-202ENST00000346436 SOD3P08294 240 aa8.96□□□□□ -0.97
CLCN6-202ENST00000346436 TMEM219Q86XT9 240 aa8.96□□□□□ -0.97
CLCN6-202ENST00000346436 PRCDQ00LT1 54 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 PRB3Q04118 309 aaPredicted RBP8.96□□□□□ -0.98
CLCN6-202ENST00000346436 RSPO1Q2MKA7 263 aaPredicted RBP8.96□□□□□ -0.98
CLCN6-202ENST00000346436 IBA57Q5T440 356 aaKnown RBP8.96□□□□□ -0.98
CLCN6-202ENST00000346436 TMEM42Q69YG0 159 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 DPRXA6NFQ7 191 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 SRRM5B3KS81 715 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 IGHV1-8P0DP01 117 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 OTX1P32242 354 aaPredicted RBP8.96□□□□□ -0.98
CLCN6-202ENST00000346436 NTF4P34130 210 aa8.96□□□□□ -0.98
CLCN6-202ENST00000346436 B3GALT5-AS1P59052 145 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms