RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ATP5J2P56134 94 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 SLC25A48Q6ZT89 311 aaKnown RBP10.79□□□□□ -0.68
CASC4-202ENST00000345795 BTF3L4Q96K17 158 aa10.79□□□□□ -0.68
CASC4-202ENST00000345795 F2RL2O00254 374 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 PNRC1Q12796 327 aaPredicted RBP10.78□□□□□ -0.68
CASC4-202ENST00000345795 GUSBP1Q15486 140 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 HLA-DRB5Q30154 266 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 TOMM20LQ6UXN7 152 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 GOLT1AQ6ZVE7 132 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 ZNF439Q8NDP4 499 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 C22orf46C9J442 243 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 PAX5Q02548 391 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 PPP1R27Q86WC6 154 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 EXOC3-AS1Q8N2X6 119 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 TMEM186Q96B77 213 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 NAGKQ9UJ70 344 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 AMMECR1Q9Y4X0 333 aaPredicted RBP10.78□□□□□ -0.68
CASC4-202ENST00000345795 ZNF785A8K8V0 405 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 WFDC12Q8WWY7 111 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 P2RX4Q99571 388 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 TUBA4BQ9H853 241 aa10.78□□□□□ -0.68
CASC4-202ENST00000345795 COL5A1P20908 1838 aaPredicted RBP10.78□□□□□ -0.68
CASC4-202ENST00000345795 CLEC3BP05452 202 aa10.77□□□□□ -0.68
CASC4-202ENST00000345795 RNASEKQ6P5S7 137 aaKnown RBP10.77□□□□□ -0.68
CASC4-202ENST00000345795 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.68
CASC4-202ENST00000345795 C8orf88P0DMB2 117 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 HTN1P15515 57 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 DEFA6Q01524 100 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 SRSF7Q16629 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
CASC4-202ENST00000345795 ZNF596Q8TC21 504 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 SFRP2Q96HF1 295 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 NEU1Q99519 415 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 ZNF253O75346 499 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 HYPMO75409 117 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 CA7P43166 264 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 UNQ5815/PRO19632Q6UWF5 114 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 MMD2Q8IY49 270 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 IFT22Q9H7X7 185 aa10.77□□□□□ -0.69
CASC4-202ENST00000345795 MRPL36Q9P0J6 103 aaKnown RBP10.77□□□□□ -0.69
CASC4-202ENST00000345795 PRCDQ00LT1 54 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 IBA57Q5T440 356 aaKnown RBP10.76□□□□□ -0.69
CASC4-202ENST00000345795 UNQ6494/PRO21346Q6UXR6 183 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 CYP2G1PQ6ZSU1 146 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 FAM19A2Q8N3H0 131 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 OSR1Q8TAX0 266 aaPredicted RBP10.76□□□□□ -0.69
CASC4-202ENST00000345795 DIRC2Q96SL1 478 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 FRMD6-AS1P0C7T7 363 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 HIST1H1BP16401 226 aaKnown RBP10.76□□□□□ -0.69
CASC4-202ENST00000345795 AMTP48728 403 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 UCNP55089 124 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 RPL19P84098 196 aaKnown RBP10.76□□□□□ -0.69
CASC4-202ENST00000345795 RUSC1-AS1Q66K80 236 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 OR51M1Q9H341 326 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 PAM16Q9Y3D7 125 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 IGHV1-3A0A0C4DH29 117 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
CASC4-202ENST00000345795 PDE6DO43924 150 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 CRISP2P16562 243 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 GPR183P32249 361 aa10.76□□□□□ -0.69
CASC4-202ENST00000345795 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
CASC4-202ENST00000345795 LINC00587B1AMM8 73 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 M0R3E3 92 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 CD69Q07108 199 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 DPM3Q9P2X0 92 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 IGKV1OR2-108A0A075B7D4 117 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 PGLYRP4Q96LB8 373 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 LHBP01229 141 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 SRD5A1P18405 259 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 NPPCP23582 126 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 MC5RP33032 325 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 VDAC2P45880 294 aaPredicted RBP10.75□□□□□ -0.69
CASC4-202ENST00000345795 DPPA3Q6W0C5 159 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 TCF24Q7RTU0 167 aa10.75□□□□□ -0.69
CASC4-202ENST00000345795 CEACAM3P40198 252 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 C11orf44Q8N8P7 122 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 TMEM170AQ8WVE7 144 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 RNASE2P10153 161 aaKnown RBP10.74□□□□□ -0.69
CASC4-202ENST00000345795 RPL29P47914 159 aaKnown RBP10.74□□□□□ -0.69
CASC4-202ENST00000345795 RPL15P61313 204 aaKnown RBP10.74□□□□□ -0.69
CASC4-202ENST00000345795 RPEL1Q2QD12 228 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 TMEM256Q8N2U0 113 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 OR5R1Q8NH85 324 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 MBD3L1Q8WWY6 194 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 TMEM167BQ9NRX6 74 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 ITPR1Q14643 2758 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 TMEM144Q7Z5S9 345 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 LINC01551Q86U37 167 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
CASC4-202ENST00000345795 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
CASC4-202ENST00000345795 LOC389332A0A1B0GUA5 103 aa10.73□□□□□ -0.69
CASC4-202ENST00000345795 CHEK1O14757 476 aa10.73□□□□□ -0.69
CASC4-202ENST00000345795 IGKV3-20P01619 116 aa10.73□□□□□ -0.69
CASC4-202ENST00000345795 NBEAP1P0C6P0 100 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms