RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 C17orf112F2Z3M2 114 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 TIMM23O14925 209 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 CRYGBP07316 175 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 HTR1DP28221 377 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 NDUFA6P56556 154 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 SELENOTP62341 195 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 WT1-ASQ06250 92 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 PSG5Q15238 335 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 BSXQ3C1V8 233 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 TPTE2P1Q5T6R2 138 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 VMO1Q7Z5L0 202 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-202ENST00000345734 MAP1LC3BQ9GZQ8 125 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 GNG13Q9P2W3 67 aa7.39□□□□□ -1.23
ATG4A-202ENST00000345734 PHOX2AO14813 284 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 TCF21O43680 179 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 GOSR1O95249 250 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 LMO4P61968 165 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 PAX2Q02962 417 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 FBLN7Q53RD9 439 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 C2orf83Q53S99 150 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 PRR31Q5SQ13 230 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 MIC13Q5XKP0 118 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 TEX45Q8NA69 505 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 CCL19Q99731 98 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 GGTLC1Q9BX51 225 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 CSTL1Q9H114 145 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 NPVFQ9HCQ7 196 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 SLC39A9Q9NUM3 307 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 DPM3Q9P2X0 92 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 LSM4Q9Y4Z0 139 aaKnown RBP7.38□□□□□ -1.23
ATG4A-202ENST00000345734 FBN2P35556 2912 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
ATG4A-202ENST00000345734 LOC102723971A0A1B0GUV8 181 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 C7orf77A4D0Y5 90 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 ZFP92A6NM28 416 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 SOX15O60248 233 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 REG1AP05451 166 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 APELAP0DMC3 54 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 CD24P25063 80 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 ERHP84090 104 aaKnown RBP7.37□□□□□ -1.23
ATG4A-202ENST00000345734 SRSF1Q07955 248 aaKnown RBP eCLIP7.37□□□□□ -1.23
ATG4A-202ENST00000345734 PRSS8Q16651 343 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 AWAT1Q58HT5 328 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 ZNF506Q5JVG8 444 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 SSMEM1Q8WWF3 244 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 LPAR2Q9HBW0 351 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-202ENST00000345734 IGHV2-70DA0A0C4DH43 119 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 CTXND1A0A1B0GTU2 59 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 C20orf202A1L168 122 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 MPDU1O75352 247 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 VENTXO95231 258 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 SRP19P09132 144 aaKnown RBP7.37□□□□□ -1.23
ATG4A-202ENST00000345734 OPRK1P41145 380 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 GNB1P62873 340 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 PMS2P11Q13670 270 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 TNXAQ16473 311 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 ACOT6Q3I5F7 207 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-202ENST00000345734 DYNAPQ8N1N2 210 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 KIR3DL3Q8N743 410 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 SIRPDQ9H106 197 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 FBXL15Q9H469 300 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 PXMP4Q9Y6I8 212 aa7.37□□□□□ -1.23
ATG4A-202ENST00000345734 POLQO75417 2590 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 INS-IGF2F8WCM5 200 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 FCN1O00602 326 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 PDLIM4P50479 330 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 MMD2Q8IY49 270 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 CYB561D1Q8N8Q1 229 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 GATAD1Q8WUU5 269 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 CFHR4Q92496 578 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 YPEL4Q96NS1 127 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 CHD6Q8TD26 2715 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 IGKV1OR2-108A0A075B7D4 117 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 KIR2DL5BA0A0G2JN68 375 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 KIR2DL5BA0A0G2JPC4 375 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 IGLC7A0M8Q6 106 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 HSPB1P04792 205 aaKnown RBP7.36□□□□□ -1.23
ATG4A-202ENST00000345734 GZMBP10144 247 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 BCL2P10415 239 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 ATP5IP56385 69 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-202ENST00000345734 SSBP2P81877 361 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-202ENST00000345734 SOHLH1Q5JUK2 328 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 PPP1R27Q86WC6 154 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 KIR2DL5AQ8N109 375 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 FAM24BQ8N5W8 94 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 OR2T6Q8NHC8 308 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 NRGNQ92686 78 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 SMIM12Q96EX1 92 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 TBX15Q96SF7 602 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 P2RX4Q99571 388 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 TXN2Q99757 166 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 C20orf24Q9BUV8 137 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 SMDT1Q9H4I9 107 aa7.36□□□□□ -1.23
ATG4A-202ENST00000345734 ANKRD17O75179 2603 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms