RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 G3V4G9 280 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 FCN1O00602 326 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 IFNA1P01562 189 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 REG1AP05451 166 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 AREGP15514 252 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 CD24P25063 80 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 PAX6P26367 422 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 IER3P46695 156 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 CDC34P49427 236 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 GAMTQ14353 236 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 C10orf91Q5T1B1 145 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 FAM122CQ6P4D5 195 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 Q6ZSV7 163 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 OR1L6Q8NGR2 347 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 ABHD5Q8WTS1 349 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 EIF5A2Q9GZV4 153 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 SLC25A22Q9H936 323 aa10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 CARHSP1Q9Y2V2 147 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-202ENST00000344114 RBFOX3A6NFN3 312 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 F8W036 122 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 IGHV4-59P01825 116 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 B2MP61769 119 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 FXYD3Q14802 87 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 SAMD5Q5TGI4 173 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 MIC13Q5XKP0 118 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 LCN15Q6UWW0 184 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 STPG3Q8N7X2 389 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 THAP8Q8NA92 274 aa10.61□□□□□ -0.71
HERPUD1-202ENST00000344114 NCBP2LA6PVI3 153 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 YIF1AO95070 293 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 HLA-DRB1P01911 266 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 APOC3P02656 99 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 CRYGCP07315 174 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 SFTA3P0C7M3 94 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 ADCYAP1P18509 176 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 TAGLN2P37802 199 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 CCL20P78556 96 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 PRR20EP86478 221 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 PRR20CP86479 221 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 PRR20DP86480 221 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 PRR20BP86481 221 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 PRR20AP86496 221 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 KHDC3LQ587J8 217 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 REC114Q7Z4M0 266 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 MISP3Q96FF7 219 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 MEGF9Q9H1U4 602 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 FNDC4Q9H6D8 234 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 SLC45A2Q9UMX9 530 aa10.6□□□□□ -0.71
HERPUD1-202ENST00000344114 LOC102723971A0A1B0GUV8 181 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 A0A1W2PPV4 95 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 CTRB1P17538 263 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 OR10J1P30954 320 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 PPT1P50897 306 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 FGF8P55075 233 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 CTRB2Q6GPI1 263 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 SVBPQ8N300 66 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 Q8N9W7 124 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 RAB24Q969Q5 203 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 ACY3Q96HD9 319 aa10.59□□□□□ -0.71
HERPUD1-202ENST00000344114 NBEAL2Q6ZNJ1 2754 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 IGKV1OR2-108A0A075B7D4 117 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 A0A0U1RQK1 487 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 NPIPB5A8MRT5 1133 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 NDUFS6O75380 124 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 HSPB1P04792 205 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 BCL2P10415 239 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 MFAP2P55001 183 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 SELENOTP62341 195 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 RHOBP62745 196 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 CX3CL1P78423 397 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 ICAM4Q14773 271 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 CYP2G1PQ6ZSU1 146 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 RASL11BQ9BPW5 248 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 SLC35B3Q9H1N7 401 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 MANBALQ9NQG1 85 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 GNG13Q9P2W3 67 aa10.58□□□□□ -0.72
HERPUD1-202ENST00000344114 TCRBV4S1A1TA0A5B7 111 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 C9JQL5 133 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 PRB2P02812 416 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 LINC00869P0C866 280 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 APELAP0DMC3 54 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 PSMB3P49720 205 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 RND2P52198 227 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 DEFA5Q01523 94 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 HAGHQ16775 308 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 TMEM116Q8NCL8 245 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 OR2T6Q8NHC8 308 aa10.57□□□□□ -0.72
HERPUD1-202ENST00000344114 IGHV7-81A0A0B4J1V7 117 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 ZFP92A6NM28 416 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 MT-CO2P00403 227 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 FBP1P09467 338 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 STAG3L2P0CL84 134 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 STAG3L3P0CL85 134 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 DEFA4P12838 97 aa10.56□□□□□ -0.72
HERPUD1-202ENST00000344114 NDPQ00604 133 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms