RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 SCO1O75880 301 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 BCL2P10415 239 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 PPT1P50897 306 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 DEFA5Q01523 94 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 PATE2Q6UY27 113 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 FAM110DQ8TAY7 271 aaPredicted RBP13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 MYO9AB2RTY4 2548 aa13.46□□□□□ -0.25
FRMD4A-202ENST00000342409 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 F8W735 103 aaPredicted RBP13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 NDUFB8O95169 186 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 IGHV4-59P01825 116 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 APOC3P02656 99 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 SRP19P09132 144 aaKnown RBP13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 OR5G3P0C626 314 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 GUCA2BQ16661 112 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 ECSCRQ19T08 205 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 ATRAIDQ6UW56 229 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 UNQ5815/PRO19632Q6UWF5 114 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 MIR17HGQ75NE6 70 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 NANPQ8TBE9 248 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 RXFP4Q8TDU9 374 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 ZNF48Q96MX3 618 aaPredicted RBP13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 SEC11CQ9BY50 192 aa13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 SONP18583 2426 aaKnown RBP13.45□□□□□ -0.26
FRMD4A-202ENST00000342409 F8W036 122 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 CRIP2P52943 208 aaPredicted RBP13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 RHOBP62745 196 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 Q6ZS46 218 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 SMDT1Q9H4I9 107 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 S4R3C0 116 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 SMAD7O15105 426 aaKnown RBP13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 IGKV1-17P01599 117 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 SELENOTP62341 195 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 AKIRIN2Q53H80 203 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 FAM78BQ5VT40 261 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 MORN5Q5VZ52 161 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 CCDC28AQ8IWP9 274 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 SLC35B3Q9H1N7 401 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 FUT9Q9Y231 359 aa13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 ANK3Q12955 4377 aaKnown RBP13.44□□□□□ -0.26
FRMD4A-202ENST00000342409 CLN5O75503 358 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 OR2J3O76001 311 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 HSPB1P04792 205 aaKnown RBP13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 IER3P46695 156 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 TIGITQ495A1 244 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 SLC35E3Q7Z769 313 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 TMUB1Q9BVT8 246 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 DOK5Q9P104 306 aa13.43□□□□□ -0.26
FRMD4A-202ENST00000342409 BLCAPP62952 87 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 SPNS3Q6ZMD2 512 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 TRBV9A0A0B4J1U6 114 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 TSPAN9O75954 239 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 IGHG2P01859 326 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 CD81P60033 236 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 C16orf82Q7Z2V1 217 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 FAM167A-AS1Q96KT0 104 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 C19orf24Q9BVV8 132 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 DNAJC4Q9NNZ3 241 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 VAX2Q9UIW0 290 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 LINC00527Q9UJ94 153 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 PITPNC1Q9UKF7 332 aa13.42□□□□□ -0.26
FRMD4A-202ENST00000342409 C9orf152Q5JTZ5 239 aa13.41□□□□□ -0.26
FRMD4A-202ENST00000342409 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
FRMD4A-202ENST00000342409 TMEM68Q96MH6 324 aa13.41□□□□□ -0.26
FRMD4A-202ENST00000342409 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
FRMD4A-202ENST00000342409 FBXL7Q9UJT9 491 aa13.41□□□□□ -0.26
FRMD4A-202ENST00000342409 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 PAGE4O60829 102 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 CXorf1O96002 111 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 IGF1P05019 195 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 PSG1P11464 419 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 GCHFRP30047 84 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 PSMB3P49720 205 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 PLP1P60201 277 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 Q6YL49 198 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 IQCF2Q8IXL9 164 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 ZNF414Q96IQ9 312 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 UHRF2Q96PU4 802 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 MANBALQ9NQG1 85 aa13.4□□□□□ -0.26
FRMD4A-202ENST00000342409 TRAV41A0A0B4J266 112 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 M0QZK8 103 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 COX7A2P2O60397 106 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 IFNA1P01562 189 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 IGHV3-23P01764 117 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 HIST1H1BP16401 226 aaKnown RBP13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 MFAP4P55083 255 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 RBMS3Q6XE24 437 aaKnown RBP13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 SLC25A2Q9BXI2 301 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 C10orf113Q5VZT2 155 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 IL17RELQ6ZVW7 336 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 OR1L4Q8NGR5 311 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 MRPL32Q9BYC8 188 aaKnown RBP13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 C21orf62Q9NYP8 219 aa13.39□□□□□ -0.27
FRMD4A-202ENST00000342409 TECRQ9NZ01 308 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms