RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TMEM147Q9BVK8 224 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 PARLQ9H300 379 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 RAB9BQ9NP90 201 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 INSIG2Q9Y5U4 225 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 VPS13CQ709C8 3753 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 CTXND1A0A1B0GTU2 59 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 YPEL1O60688 119 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 KRTDAPP60985 99 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 HTD2P86397 168 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 PRR27Q6MZM9 219 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 OR2D3Q8NGH3 330 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 NEIL1Q96FI4 390 aaPredicted RBP10.61□□□□□ -0.71
COL18A1-201ENST00000342220 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 MANBALQ9NQG1 85 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
COL18A1-201ENST00000342220 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
COL18A1-201ENST00000342220 EIF4EBP1Q13541 118 aaPredicted RBP10.6□□□□□ -0.71
COL18A1-201ENST00000342220 TEX36Q5VZQ5 186 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 CFAP161Q6P656 301 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 CENPVQ7Z7K6 275 aaPredicted RBP10.6□□□□□ -0.71
COL18A1-201ENST00000342220 OR10P1Q8NGE3 313 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 OR4S2Q8NH73 311 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 MEGF9Q9H1U4 602 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 EFNB3Q15768 340 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 SSX8Q7RTT4 187 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 FAM103A1Q9BTL3 118 aaKnown RBP10.6□□□□□ -0.71
COL18A1-201ENST00000342220 NCBP2LA6PVI3 153 aaKnown RBP10.6□□□□□ -0.71
COL18A1-201ENST00000342220 PAGE4O60829 102 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 WFDC12Q8WWY7 111 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 SSBP3Q9BWW4 388 aaPredicted RBP10.6□□□□□ -0.71
COL18A1-201ENST00000342220 NPCDR1Q9BY65 106 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 UQCR10Q9UDW1 63 aa10.6□□□□□ -0.71
COL18A1-201ENST00000342220 TPPP2P59282 170 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 C19orf35Q6ZS72 473 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 ZBTB34Q8NCN2 500 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 FAM222BQ8WU58 562 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 PYGO2Q9BRQ0 406 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 HCFC1P51610 2035 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 HRASP01112 189 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 IGHV1-8P0DP01 117 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 OR10W1Q8NGF6 305 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 A0A0U1RQK1 487 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 K7ERU9 68 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 CNTFRP26992 372 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 OR4A47Q6IF82 309 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 HCP5Q6MZN7 132 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
COL18A1-201ENST00000342220 COMMD5Q9GZQ3 224 aa10.59□□□□□ -0.71
COL18A1-201ENST00000342220 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-201ENST00000342220 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 J3QR06 171 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 CT45A6P0DMU7 189 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 CT45A5P0DMU8 189 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 CT45A7P0DMV0 189 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 COX6B1P14854 86 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 SLC45A2Q9UMX9 530 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 SRRM4A7MD48 611 aaKnown RBP10.58□□□□□ -0.72
COL18A1-201ENST00000342220 F2RL2O00254 374 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 CNIH1O95406 144 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 GCSAMLQ5JQS6 135 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 RITA1Q96K30 269 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 S4R3C0 116 aa10.58□□□□□ -0.72
COL18A1-201ENST00000342220 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 OR4B1Q8NGF8 309 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 WNK1Q9H4A3 2382 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 NDUFS8O00217 210 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 HYPMO75409 117 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 NBEAP1P0C6P0 100 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 NPPCP23582 126 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 TNXAQ16473 311 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 ITPR2Q14571 2701 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
COL18A1-201ENST00000342220 LIPFP07098 398 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 FAM78BQ5VT40 261 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 OR5AU1Q8NGC0 362 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 OR9G1Q8NH87 305 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 TMEM133Q9H2Q1 129 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 CHODLQ9H9P2 273 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 TPSG1Q9NRR2 321 aa10.57□□□□□ -0.72
COL18A1-201ENST00000342220 IGHV2-26A0A0B4J1V2 119 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 DIRC3C9JPN6 131 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 MLANAQ16655 118 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 SAA1P0DJI8 122 aaPredicted RBP10.56□□□□□ -0.72
COL18A1-201ENST00000342220 PRB4P10163 310 aaPredicted RBP10.56□□□□□ -0.72
COL18A1-201ENST00000342220 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
COL18A1-201ENST00000342220 THBS3P49746 956 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 FBXL15Q9H469 300 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 C15orf62A8K5M9 175 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 BRD3OSQ6XYD6 125 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 CLEC5AQ9NY25 188 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 OR51B2Q9Y5P1 312 aa10.56□□□□□ -0.72
COL18A1-201ENST00000342220 VWC2Q2TAL6 325 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms