RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 DTX1Q86Y01 620 aa10.37□□□□□ -0.75
SSX2IP-201ENST00000342203 FAM216BQ8N7L0 139 aa10.37□□□□□ -0.75
SSX2IP-201ENST00000342203 LMO1P25800 156 aa10.37□□□□□ -0.75
SSX2IP-201ENST00000342203 GCSAMQ8N6F7 178 aa10.37□□□□□ -0.75
SSX2IP-201ENST00000342203 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
SSX2IP-201ENST00000342203 PLXNB1O43157 2135 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 C15orf61A6NNL5 157 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 NPPCP23582 126 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 SAA2-SAA4A0A096LPE2 208 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 GFRA3O60609 400 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 SAA2P0DJI9 122 aaPredicted RBP10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 TMUB1Q9BVT8 246 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 MRPL52Q86TS9 123 aaKnown RBP10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 IGHV3OR16-8A0A075B7F1 116 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 TDHQ8IZJ6 230 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 MED13Q9UHV7 2174 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 SYS1-DBNDD2H3BUS1 97 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 ITGB1BP1O14713 200 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 TGFAP01135 160 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 AREGP15514 252 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 RPL15P61313 204 aaKnown RBP10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 SLAQ13239 276 aa10.36□□□□□ -0.75
SSX2IP-201ENST00000342203 SRSF7Q16629 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 SPANXN1Q5VSR9 72 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 Q6P435 159 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 RAB1CQ92928 201 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 ZNF257Q9Y2Q1 563 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 FRMD6-AS1P0C7T7 363 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 CECR9P0C854 216 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 EPDR1Q9UM22 224 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 A0A0C4DFX4 3053 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 TRAV8-1A0A0A6YYK1 113 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 SAA1P0DJI8 122 aaPredicted RBP10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 PSG9Q00887 426 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 WDR82Q6UXN9 313 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 DNASE2BQ8WZ79 361 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 GUSBP1Q15486 140 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 Q6ZS49 121 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 WDR31Q8NA23 367 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 ASCL2Q99929 193 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 GP6Q9HCN6 339 aa10.35□□□□□ -0.75
SSX2IP-201ENST00000342203 PRRG2O14669 202 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 ZNF418Q8TF45 676 aaPredicted RBP10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 Q9H3A6 140 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 TICRRQ7Z2Z1 1910 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 MGPP08493 103 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 TMEM108Q6UXF1 575 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 A0A0G2JLM5 398 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 OR4C13Q8NGP0 309 aa10.34□□□□□ -0.75
SSX2IP-201ENST00000342203 IGHV2OR16-5A0A0B4J2B6 119 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 CD69Q07108 199 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 ZFP36L1Q07352 338 aaKnown RBP10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 MRPL20Q9BYC9 149 aaKnown RBP10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 C1orf185Q5T7R7 199 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 FOXC2Q99958 501 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 COQ2Q96H96 371 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 NRN1LQ496H8 165 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 FAM169BQ8N8A8 192 aa10.33□□□□□ -0.76
SSX2IP-201ENST00000342203 IL4P05112 153 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 CCL3L1P16619 93 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 IGLV3-19P01714 112 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 CIARTQ8N365 385 aaPredicted RBP10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 V9GYV3 84 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 UPK2O00526 184 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 LTBRP36941 435 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 SSC4DQ8WTU2 575 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 IGHV1-2P23083 117 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 LYRM7Q5U5X0 104 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 ZC2HC1AQ96GY0 325 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 SIGMAR1Q99720 223 aa10.32□□□□□ -0.76
SSX2IP-201ENST00000342203 PPIAL4EA0A075B759 164 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 PPIAL4FP0DN26 164 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 SEC11AP67812 179 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 FOXL2NBQ6ZUU3 175 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 MRPL27Q9P0M9 148 aaKnown RBP10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 HTTP42858 3142 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 TRBV20OR9-2A0A075B6H5 130 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 KBTBD11-OT1A0A1B0GTJ5 212 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 IGLV3-1P01715 115 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 OR1N2Q8NGR9 330 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 K7EN84 100 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 YPEL1O60688 119 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 PDLIM4P50479 330 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 ZCCHC24Q8N2G6 241 aaKnown RBP10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 DPF1Q92782 380 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 TMEM186Q96B77 213 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 YPEL2Q96QA6 119 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 LOC102723996A0A087X1L8 192 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 TRBV6-6A0A0A6YYG2 114 aa10.31□□□□□ -0.76
SSX2IP-201ENST00000342203 IQCF6A8MYZ5 107 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms