RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 CA1P00915 261 aaPredicted RBP12.59□□□□□ -0.39
COL11A2-201ENST00000341947 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
COL11A2-201ENST00000341947 OOSP1A8MZH6 123 aa12.59□□□□□ -0.39
COL11A2-201ENST00000341947 OR10W1Q8NGF6 305 aa12.59□□□□□ -0.39
COL11A2-201ENST00000341947 NRN1Q9NPD7 142 aa12.59□□□□□ -0.39
COL11A2-201ENST00000341947 FGFBP3Q8TAT2 258 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
COL11A2-201ENST00000341947 RPUSD1Q9UJJ7 312 aaKnown RBP12.58□□□□□ -0.4
COL11A2-201ENST00000341947 NIT1Q86X76 327 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 CST9LQ9H4G1 147 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 IGHV1-3A0A0C4DH29 117 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 PSCAO43653 123 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 IGKCP01834 107 aa12.58□□□□□ -0.4
COL11A2-201ENST00000341947 TRAV8-2A0A0B4J237 113 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 CDK2AP2O75956 126 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
COL11A2-201ENST00000341947 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
COL11A2-201ENST00000341947 CRYGSP22914 178 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 TMEM170AQ8WVE7 144 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 ANKRD36A6QL64 1941 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 SRRM5B3KS81 715 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
COL11A2-201ENST00000341947 UNQ6494/PRO21346Q6UXR6 183 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 SLC25A2Q9BXI2 301 aa12.57□□□□□ -0.4
COL11A2-201ENST00000341947 GGTLC3B5MD39 225 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 RPL15P61313 204 aaKnown RBP12.56□□□□□ -0.4
COL11A2-201ENST00000341947 RNF5Q99942 180 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
COL11A2-201ENST00000341947 TRBV7-1A0A0A6YYK4 115 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 H3BUX3 64 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
COL11A2-201ENST00000341947 SRSF7Q16629 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL11A2-201ENST00000341947 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 RNF126Q9BV68 326 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 H3BUT2 72 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 HEPN1Q6WQI6 88 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 GGNQ86UU5 652 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 MTCL1Q9Y4B5 1905 aaKnown RBP12.56□□□□□ -0.4
COL11A2-201ENST00000341947 IGHV3-64A0A075B6Q5 118 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 TRGV1A0A0A0MS02 117 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 NRXN2Q9P2S2 1712 aa12.56□□□□□ -0.4
COL11A2-201ENST00000341947 M0R1W7 72 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 RPL36AP83881 106 aaKnown RBP12.55□□□□□ -0.4
COL11A2-201ENST00000341947 RPL36ALQ969Q0 106 aaKnown RBP12.55□□□□□ -0.4
COL11A2-201ENST00000341947 CHCHD1Q96BP2 118 aaKnown RBP12.55□□□□□ -0.4
COL11A2-201ENST00000341947 TRAV5A0A0B4J249 113 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 NPIPB5A8MRT5 1133 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 LYPD3O95274 346 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 LAGE3Q14657 143 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 JPT2Q9H910 190 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 A0A0U1RRA0 63 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
COL11A2-201ENST00000341947 BRD3OSQ6XYD6 125 aa12.55□□□□□ -0.4
COL11A2-201ENST00000341947 A0A0A6YYD4 124 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 A0A1B0GV72 72 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 ATP5L2Q7Z4Y8 100 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
COL11A2-201ENST00000341947 GNB1LQ9BYB4 327 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 ZNF319Q9P2F9 582 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 A0A0G2JNJ9 132 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 LHFPL4Q7Z7J7 247 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 SPOCK3Q9BQ16 436 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 Q9UFV3 132 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 ID3Q02535 119 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 ACTL10Q5JWF8 245 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 SLC25A39Q9BZJ4 359 aaPredicted RBP12.54□□□□□ -0.4
COL11A2-201ENST00000341947 A0A1B0GWJ7 208 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 SLC25A16P16260 332 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
COL11A2-201ENST00000341947 PMS2P5A8MQ11 134 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 C10orf55Q5SWW7 151 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 KLHL30-AS1Q8NEE0 82 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 M0R2P5 195 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 LINC01356Q8N9X3 169 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 RNF114Q9Y508 228 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 LINC00587B1AMM8 73 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 C9orf139Q6ZV77 190 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 C1QTNF4Q9BXJ3 329 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 PSG1P11464 419 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
COL11A2-201ENST00000341947 TREML4Q6UXN2 200 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 USMG5Q96IX5 58 aa12.53□□□□□ -0.4
COL11A2-201ENST00000341947 A8MXK9 166 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.4
COL11A2-201ENST00000341947 MBD3L1Q8WWY6 194 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 SCN10AQ9Y5Y9 1956 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms