RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 PRTN3P24158 256 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 ZIC1Q15915 447 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 KCNK17Q96T54 332 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 IRF2P14316 349 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 NMUP48645 174 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 CRYBA4P53673 196 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 LY6G6FQ5SQ64 297 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 LRRC75AQ8NAA5 344 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 RNF183Q96D59 192 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 KLHDC7BQ96G42 594 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 YPEL4Q96NS1 127 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 GAGE12HA6NDE8 117 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 ACYP1P07311 99 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 ZP1P60852 638 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 PQLC2Q6ZP29 291 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 FUT6P51993 359 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 SLC25A47Q6Q0C1 308 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 SLC25A33Q9BSK2 321 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 CCL1P22362 96 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 CNEP1R1Q8N9A8 125 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 SH2D2AQ9NP31 389 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 PPP1CCP36873 323 aaKnown RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 IGHV3OR16-12A0A075B7B8 117 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 SLC25A2Q9BXI2 301 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM167BQ9NRX6 74 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 FER1L6-AS1Q8NA97 138 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 SDF2L1Q9HCN8 221 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 CACNG5Q9UF02 275 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 NEUROG3Q9Y4Z2 214 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 FRG2CA6NGY1 282 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 MSGN1A6NI15 193 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 ADARB2-AS1A8MUL3 147 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 RPS21P63220 83 aaKnown RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 OR2T6Q8NHC8 308 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 MYOZ3Q8TDC0 251 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 QTRT1Q9BXR0 403 aaKnown RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 LINC00271P0C7V0 271 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 PEBP1P30086 187 aaKnown RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 TRAV8-1A0A0A6YYK1 113 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 CSRP1P21291 193 aaKnown RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 PLGLAQ15195 96 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 SPATA25Q9BR10 227 aa2.99□□□□□ -1.93
SYNE1-201ENST00000341594 MBNL3Q9NUK0 354 aaKnown RBP2.99□□□□□ -1.93
SYNE1-201ENST00000341594 FAM222BQ8WU58 562 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 FOXB1Q99853 325 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 OR2H1Q9GZK4 316 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 TMEM50AO95807 157 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 IGKV1D-16P01601 117 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 COL9A1P20849 921 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CYB561D1Q8N8Q1 229 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 OR10J6PQ8NGY7 276 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 WDR54Q9H977 334 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 BHLHA9Q7RTU4 235 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 NAT6Q93015 286 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 SAP30O75446 220 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF585BQ52M93 769 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 SPINK14Q6IE38 97 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CBLN3Q6UW01 205 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 A0A1W2PQF6 199 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 QRFPP83859 136 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CD226Q15762 336 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CLDND2Q8NHS1 167 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 MRM2Q9UI43 246 aaKnown RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CES1P1Q9UKY3 287 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 ZNF664Q8N3J9 261 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 ONECUT1Q9UBC0 465 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 NANOS3P60323 173 aaKnown RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 LOC102723996A0A087X1L8 192 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 MLNRO43193 412 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 OPRK1P41145 380 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 PFN1P07737 140 aaKnown RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 FAM231DQ6ZW35 169 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 PIN1P1O15428 100 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 DAD1P61803 113 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 PIGYQ3MUY2 71 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 C1orf195Q5TG92 126 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CCL25O15444 150 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 FGF17O60258 216 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CEACAM8P31997 349 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 MRPL30Q8TCC3 161 aaKnown RBP2.98□□□□□ -1.93
SYNE1-201ENST00000341594 LILRA1O75019 489 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 OR2H2O95918 312 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 DNAL4O96015 105 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 FAM159AQ6UWV7 190 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 RETNQ9HD89 108 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 PIEZO1Q92508 2521 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 IGLV3-32A0A0A0MS00 114 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 WNT9BO14905 357 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 CRYGBP07316 175 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 HLA-DRB4P13762 266 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 FOXE3Q13461 319 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 OR1C1Q15619 314 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 HLA-DRB4X5D2U9 266 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 RIGQ13278 110 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 OR1F12Q8NHA8 337 aa2.98□□□□□ -1.93
SYNE1-201ENST00000341594 HSD17B10Q99714 261 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms