RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 B5MCH6 92 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 LEPROTL1O95214 131 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 FAM87AP0C7U9 286 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 PCBD1P61457 104 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 CENPWQ5EE01 88 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 SSX8Q7RTT4 187 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 DDB2Q92466 427 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 VGLL1Q99990 258 aa9.71□□□□□ -0.85
RTN3-203ENST00000341307 ZNF331Q9NQX6 463 aaPredicted RBP9.71□□□□□ -0.85
RTN3-203ENST00000341307 IGSF10Q6WRI0 2623 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 KBTBD11-OT1A0A1B0GTJ5 212 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 HELTA6NFD8 242 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 COL8A2P25067 703 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 ID1P41134 155 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 DEFB109BQ30KR1 87 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 Q6ZS49 121 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 Q6ZSR3 168 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 GCSAMQ8N6F7 178 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 ZNF611Q8N823 705 aa9.71□□□□□ -0.86
RTN3-203ENST00000341307 A0A1W2PPV4 95 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 C5orf49A4QMS7 147 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 LRRC30A6NM36 301 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 TMEM178AQ8NBL3 297 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 PIGCQ92535 297 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 hCG_38984A0A1B0GV85 526 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 OR2J3O76001 311 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 SPINK8P0C7L1 97 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 EDDM3BP56851 147 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 NDFIP1Q9BT67 221 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 LINC00312Q9Y6C7 94 aa9.7□□□□□ -0.86
RTN3-203ENST00000341307 NGFP01138 241 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 IGHV3-7P01780 117 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 PRR31Q5SQ13 230 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 TIMM23BQ5SRD1 257 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 PQLC2Q6ZP29 291 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 ARPC1AQ92747 370 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 C20orf78Q9BR46 151 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 COL12A1Q99715 3063 aa9.69□□□□□ -0.86
RTN3-203ENST00000341307 H0Y8G0 127 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 CXorf1O96002 111 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 OR9G9P0C7N8 305 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 RBM11P57052 281 aaKnown RBP9.68□□□□□ -0.86
RTN3-203ENST00000341307 ASPHD1Q5U4P2 390 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 FAM168AQ92567 244 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 DPF1Q92782 380 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 MBNL3Q9NUK0 354 aaKnown RBP9.68□□□□□ -0.86
RTN3-203ENST00000341307 UFC1Q9Y3C8 167 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 F8W1H4 67 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 TEPPQ6URK8 271 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 PCSK4Q6UW60 755 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 BORCS8Q96FH0 119 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 C1QTNF5Q9BXJ0 243 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 KCNS2Q9ULS6 477 aa9.68□□□□□ -0.86
RTN3-203ENST00000341307 FAM90A26D6RGX4 464 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 RASL11AQ6T310 242 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 TEX45Q8NA69 505 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 MTCH1Q9NZJ7 389 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 HSPB8Q9UJY1 196 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 KMT2BQ9UMN6 2715 aaPredicted RBP9.67□□□□□ -0.86
RTN3-203ENST00000341307 DIDO1Q9BTC0 2240 aaKnown RBP9.67□□□□□ -0.86
RTN3-203ENST00000341307 IGLV2-14P01704 120 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 IGLV2-8P01709 118 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 CFHR2P36980 270 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 GUSBP1Q15486 140 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 IBA57Q5T440 356 aaKnown RBP9.67□□□□□ -0.86
RTN3-203ENST00000341307 TMEM42Q69YG0 159 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 OR10X1Q8NGY0 326 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 OR4A16Q8NH70 328 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 HARBI1Q96MB7 349 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 GGTLC1Q9BX51 225 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 MPC1Q9Y5U8 109 aa9.67□□□□□ -0.86
RTN3-203ENST00000341307 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 GCHFRP30047 84 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 MFAP2P55001 183 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 ZNF645Q8N7E2 425 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 NANOS1Q8WY41 292 aaKnown RBP9.66□□□□□ -0.86
RTN3-203ENST00000341307 TRIB1Q96RU8 372 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 SSBP3Q9BWW4 388 aaPredicted RBP9.66□□□□□ -0.86
RTN3-203ENST00000341307 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 PRDM14Q9GZV8 571 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 IL36RNQ9UBH0 155 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 CYSLTR1Q9Y271 337 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 CFAP46Q8IYW2 2715 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 A0A1W2PRD5 423 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 C3orf80F5H4A9 247 aa9.66□□□□□ -0.86
RTN3-203ENST00000341307 VDAC2P45880 294 aaPredicted RBP9.66□□□□□ -0.86
RTN3-203ENST00000341307 PDLIM3Q53GG5 364 aaPredicted RBP9.66□□□□□ -0.86
RTN3-203ENST00000341307 TMEM116Q8NCL8 245 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms