RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 IGLC7A0M8Q6 106 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 IGHV3-48P01763 117 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 REG1AP05451 166 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 PVRIGQ6DKI7 326 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 TMEM136Q6ZRR5 245 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 TNFRSF14Q92956 283 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 FXYD5Q96DB9 178 aa11.7□□□□□ -0.54
TDP2-201ENST00000341060 POLR3KQ9Y2Y1 108 aaPredicted RBP11.7□□□□□ -0.54
TDP2-201ENST00000341060 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 CRYGCP07315 174 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 ETFRF1Q6IPR1 90 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 Q6ZWC4 215 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 ZNF329Q86UD4 541 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 TEX45Q8NA69 505 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 SPTA1P02549 2419 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 RELNP78509 3460 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 TPRP12270 2363 aaKnown RBP11.69□□□□□ -0.54
TDP2-201ENST00000341060 APOBEC3AP31941 199 aaPredicted RBP11.69□□□□□ -0.54
TDP2-201ENST00000341060 C1orf194Q5T5A4 169 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 BAGE3Q86Y29 109 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 BAGE2Q86Y30 109 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 LINC00479Q96M42 142 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 C2orf88Q9BSF0 95 aa11.69□□□□□ -0.54
TDP2-201ENST00000341060 ATRXP46100 2492 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 A0A1B0GV90 55 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 C22orf46C9J442 243 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 F2Z2F3 143 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 PEX7O00628 323 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 ENSAO43768 121 aaKnown RBP11.68□□□□□ -0.54
TDP2-201ENST00000341060 SPINK4O60575 86 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 HLA-DQA1P01909 254 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 AMY1AP04745 511 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 UCNP55089 124 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 TCL1AP56279 114 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 PRR30Q53SZ7 412 aaPredicted RBP11.68□□□□□ -0.54
TDP2-201ENST00000341060 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 IGLV1-47P01700 117 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 MYCNOSP40205 109 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 SLC35B1P78383 322 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 STXBP6Q8NFX7 210 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 GNB4Q9HAV0 340 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 SERTAD4Q9NUC0 356 aa11.68□□□□□ -0.54
TDP2-201ENST00000341060 IZUMO1RA6ND01 250 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 B9A039 149 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 MOSP00540 346 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 CRYGBP07316 175 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 SNRPCP09234 159 aaKnown RBP11.67□□□□□ -0.54
TDP2-201ENST00000341060 MFAP2P55001 183 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 RUSC1-AS1Q66K80 236 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 TMEM116Q8NCL8 245 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 MISP3Q96FF7 219 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 TRGV9Q99603 122 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 TNFRSF19Q9NS68 423 aa11.67□□□□□ -0.54
TDP2-201ENST00000341060 RPL27AP46776 148 aaKnown RBP11.66□□□□□ -0.54
TDP2-201ENST00000341060 CASP6P55212 293 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 TNXAQ16473 311 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 MRPL54Q6P161 138 aaKnown RBP11.66□□□□□ -0.54
TDP2-201ENST00000341060 C22orf15Q8WYQ4 148 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 MBD6Q96DN6 1003 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 PERPQ96FX8 193 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 TBX15Q96SF7 602 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 HSPB9Q9BQS6 159 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 RALYQ9UKM9 306 aaKnown RBP11.66□□□□□ -0.54
TDP2-201ENST00000341060 PLAUP00749 431 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
TDP2-201ENST00000341060 CD3EP07766 207 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 CD33P20138 364 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 BRS3P32247 399 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
TDP2-201ENST00000341060 PRRX1P54821 245 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 PAX2Q02962 417 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 RBPJQ06330 500 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 FAM168AQ92567 244 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 SAMD10Q9BYL1 202 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
TDP2-201ENST00000341060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.65□□□□□ -0.54
TDP2-201ENST00000341060 ZNF705FA8MVS1 300 aaPredicted RBP11.65□□□□□ -0.54
TDP2-201ENST00000341060 CORTO00230 105 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 ZNF705DP0CH99 300 aaPredicted RBP11.65□□□□□ -0.54
TDP2-201ENST00000341060 ZNF705BP0CI00 300 aaPredicted RBP11.65□□□□□ -0.54
TDP2-201ENST00000341060 CNTFRP26992 372 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 RASL11AQ6T310 242 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
TDP2-201ENST00000341060 VKORC1Q9BQB6 163 aa11.65□□□□□ -0.54
TDP2-201ENST00000341060 TRAV34A0A0B4J273 112 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 BUB1B-PAK6H3BSN5 160 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms