RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RELBQ01201 579 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
LIN54-201ENST00000340417 CACNA1AO00555 2505 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 ISLRO14498 428 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 LMO1P25800 156 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 GCHFRP30047 84 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 ZNF345Q14585 488 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 SIGIRRQ6IA17 410 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 ANAPC16Q96DE5 110 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 TXNDC17Q9BRA2 123 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 BATFQ16520 125 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 EIF4E3Q8N5X7 224 aaKnown RBP10.39□□□□□ -0.75
LIN54-201ENST00000340417 SEC11CQ9BY50 192 aa10.39□□□□□ -0.75
LIN54-201ENST00000340417 F11RQ9Y624 299 aaKnown RBP10.39□□□□□ -0.75
LIN54-201ENST00000340417 NAT1P18440 290 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 DAZ1Q9NQZ3 744 aaKnown RBP10.38□□□□□ -0.75
LIN54-201ENST00000340417 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 ARL2-SNX15V9GYD0 113 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 DOCK10Q96BY6 2186 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 CD7P09564 240 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 RHPN1-AS1Q9BWJ2 59 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 FGF16O43320 207 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 PRSS1P07477 247 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 ELANEP08246 267 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 CTSZQ9UBR2 303 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 A0A1B0GWJ7 208 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 PNRC1Q12796 327 aaPredicted RBP10.38□□□□□ -0.75
LIN54-201ENST00000340417 OR5AN1Q8NGI8 311 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 IFT22Q9H7X7 185 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 ZNF581Q9P0T4 197 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 TNFRSF18Q9Y5U5 241 aa10.38□□□□□ -0.75
LIN54-201ENST00000340417 H7C1H1 209 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 BCL2P10415 239 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
LIN54-201ENST00000340417 GFI1Q99684 422 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 PMCHP20382 165 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 CNTFRP26992 372 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 MUC21Q5SSG8 566 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 PRSS57Q6UWY2 283 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 YLPM1P49750 1951 aaKnown RBP10.37□□□□□ -0.75
LIN54-201ENST00000340417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.37□□□□□ -0.759e-8■■■■■ 29.1
LIN54-201ENST00000340417 M0R381 172 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 NCOR1P1Q9H4R4 102 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 MED13Q9UHV7 2174 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
LIN54-201ENST00000340417 TMEM88Q6PEY1 159 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 C17orf58Q2M2W7 97 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 STPG2Q8N412 459 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 KCNS1Q96KK3 526 aa10.37□□□□□ -0.75
LIN54-201ENST00000340417 PACRGQ96M98 296 aaPredicted RBP10.37□□□□□ -0.75
LIN54-201ENST00000340417 LINC00473A8K010 186 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 ASCL4Q6XD76 172 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 NEU1Q99519 415 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 TRAV3A0A0B4J244 114 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 ITGB1BP1O14713 200 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 IGKV1-16P04430 117 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 ZNF841Q6ZN19 808 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 RPL35P42766 123 aaKnown RBP10.36□□□□□ -0.75
LIN54-201ENST00000340417 UBE2E2Q96LR5 201 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 Q9H3A6 140 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 CENPVL3A0A0U1RRI6 287 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 HERPUD1Q15011 391 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 HIST1H2BAQ96A08 127 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 HEATR5AQ86XA9 2040 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 CD5LO43866 347 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 APOC4P55056 127 aa10.36□□□□□ -0.75
LIN54-201ENST00000340417 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
LIN54-201ENST00000340417 LINC00205P59089 165 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 NR2C2APQ86WQ0 139 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 MYOZ3Q8TDC0 251 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 FXYD7P58549 80 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 AQP10Q96PS8 301 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 LOC389332A0A1B0GUA5 103 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 FABP4P15090 132 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 C2orf83Q53S99 150 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 SPRNQ5BIV9 151 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 CIARTQ8N365 385 aaPredicted RBP10.35□□□□□ -0.75
LIN54-201ENST00000340417 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 DENND4AQ7Z401 1863 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 TRGV11A0A075B6L2 103 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 PDZD11Q5EBL8 140 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
LIN54-201ENST00000340417 PTPN13Q12923 2485 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 DANCRP0C864 163 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 CKS2P33552 79 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 CXorf65A6NEN9 183 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 CCL24O00175 119 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 CADP27708 2225 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 COX19Q49B96 90 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 ZNF833PQ6ZTB9 187 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 OR11H4Q8NGC9 324 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms