RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 VWC2Q2TAL6 325 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 TIGITQ495A1 244 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 PQLC2Q6ZP29 291 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 C1QL4Q86Z23 238 aa8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 RBM14Q96PK6 669 aaKnown RBP8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 SOX21Q9Y651 276 aaPredicted RBP8.14□□□□□ -1.11
RBFOX1-202ENST00000340209 EFNA4P52798 201 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 MFAP2P55001 183 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 TAS2R45P59539 299 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 DNAJC4Q9NNZ3 241 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 LSM4Q9Y4Z0 139 aaKnown RBP8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 IGLC7A0M8Q6 106 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 NBR2O15453 112 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 RPL29P47914 159 aaKnown RBP8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 POU2AF1Q16633 256 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 PAXXQ9BUH6 204 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 HECTD1Q9ULT8 2610 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 TRAV40A0A0B4J280 105 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 PPP5D1E7EU14 171 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 BPIFB3P59826 476 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 C11orf71Q6IPW1 123 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 RASL11BQ9BPW5 248 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 IGHV3-66A0A0C4DH42 116 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 CA1P00915 261 aaPredicted RBP8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 IGHV4-39P01824 125 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 S100A9P06702 114 aaKnown RBP8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 MRPL41Q8IXM3 137 aaKnown RBP8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 LINC00311Q8N616 119 aa8.13□□□□□ -1.11
RBFOX1-202ENST00000340209 SLC25A5P05141 298 aaKnown RBP8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 C8orf88P0DMB2 117 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 SAA4P35542 130 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 COMPP49747 757 aaPredicted RBP8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 GNG4P50150 75 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 LY86O95711 162 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 S100A2P29034 98 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 SGMS2Q8NHU3 365 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 FAM168AQ92567 244 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 C12orf57Q99622 126 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 PARD6GQ9BYG4 376 aaPredicted RBP8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 RNASE7Q9H1E1 156 aaKnown RBP8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 GNG7O60262 68 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 CENPWQ5EE01 88 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
RBFOX1-202ENST00000340209 HELTA6NFD8 242 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 ZNF207O43670 478 aaKnown RBP8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PDE6DO43924 150 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRRC2AP48634 2157 aaKnown RBP8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 TRBV20OR9-2A0A075B6H5 130 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRTN3P24158 256 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 CX3CL1P78423 397 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 CENPVQ7Z7K6 275 aaPredicted RBP8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 IGHV4-61A0A0C4DH41 118 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 OR2T8A6NH00 312 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 IL4P05112 153 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRR20EP86478 221 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRR20CP86479 221 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRR20DP86480 221 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRR20BP86481 221 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 PRR20AP86496 221 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 CLEC2AQ6UVW9 174 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 TEX45Q8NA69 505 aa8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 BBC3Q96PG8 261 aaPredicted RBP8.11□□□□□ -1.11
RBFOX1-202ENST00000340209 TCRBV4S1A1TA0A5B7 111 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 SEC14L6B5MCN3 397 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 CLN5O75503 358 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 BEND2Q8NDZ0 799 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 HELZ2Q9BYK8 2649 aaKnown RBP8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 GGTLC3B5MD39 225 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 IGHV2-5P01817 119 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 PSG1P11464 419 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 NDPQ00604 133 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 LINC01551Q86U37 167 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 OR2T10Q8NGZ9 312 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 IMMP2LQ96T52 175 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 TPPP3Q9BW30 176 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 SORL1Q92673 2214 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 ZFHX3Q15911 3703 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 PGPA6NDG6 321 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 HYPMO75409 117 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 TRGC1P0CF51 173 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 UNQ5815/PRO19632Q6UWF5 114 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 MALSU1Q96EH3 234 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 OR51M1Q9H341 326 aa8.1□□□□□ -1.11
RBFOX1-202ENST00000340209 IGKV3-7A0A075B6H7 116 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 AGAP20933 346 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 FCGR2BP31994 310 aaPredicted RBP8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 UBE2G1P62253 170 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 OR10G8Q8NGN5 311 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 ARPC1AQ92747 370 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 TMEM167BQ9NRX6 74 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 G3V318 75 aa8.09□□□□□ -1.11
RBFOX1-202ENST00000340209 FABP4P15090 132 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms