RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 FAM90A14PP0C7W9 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM90A24PP0C7X0 464 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 MC5RP33032 325 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 IGLV3-21P80748 117 aaPredicted RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 ID3Q02535 119 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FAM71F2Q6NXP2 309 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 TTC9CQ8N5M4 171 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 A0A087WWC5 75 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 C5orf67F2Z3F1 127 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 MPV17L2Q567V2 206 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 C10orf128Q5T292 105 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 SEPSECSQ9HD40 501 aaKnown RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 C21orf140B9A014 251 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 IGHV3-11P01762 117 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 NUTF2P61970 127 aaKnown RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 C18orf12Q96KH6 178 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 MRPL20Q9BYC9 149 aaKnown RBP7.27□□□□□ -1.25
RTN3-202ENST00000339997 LINC00527Q9UJ94 153 aa7.27□□□□□ -1.25
RTN3-202ENST00000339997 FOXH1O75593 365 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 NCR2O95944 276 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 FDCSPQ8NFU4 85 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 SAP25Q8TEE9 199 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 LINC00479Q96M42 142 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 JPT1Q9UK76 154 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 MLANAQ16655 118 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 MAJINQ3KP22 176 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 ACP7Q6ZNF0 438 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 C1orf122Q6ZSJ8 110 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 MYO9AB2RTY4 2548 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 DCHS1Q96JQ0 3298 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 IGKV1-27A0A075B6S5 117 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 TRBV7-9A0A0J9YWB2 115 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 OR9G9P0C7N8 305 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 TPTE2P1Q5T6R2 138 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 CLEC2AQ6UVW9 174 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 YLPM1P49750 1951 aaKnown RBP7.26□□□□□ -1.25
RTN3-202ENST00000339997 CASP8AP2Q9UKL3 1982 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 FREM1Q5H8C1 2179 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 TRAV8-1A0A0A6YYK1 113 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 CTSSP25774 331 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 PPP1R32Q7Z5V6 425 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 GCSAMQ8N6F7 178 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 RNASEH2CQ8TDP1 164 aaKnown RBP7.26□□□□□ -1.25
RTN3-202ENST00000339997 TMEM54Q969K7 222 aa7.26□□□□□ -1.25
RTN3-202ENST00000339997 DOCK4Q8N1I0 1966 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 GREB1Q4ZG55 1949 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 DLEU1O43261 78 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 TSPOP30536 169 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 EFNB3Q15768 340 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 GTSF1LQ9H1H1 148 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 Q9H3A6 140 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 CCDC168Q8NDH2 2452 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 SAPCD1Q5SSQ6 148 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 PHLDA1Q8WV24 401 aaPredicted RBP7.25□□□□□ -1.25
RTN3-202ENST00000339997 MYO16Q9Y6X6 1858 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 CUL9Q8IWT3 2517 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 TRAV3A0A0B4J244 114 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 UMODP07911 640 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 ZNF146Q15072 292 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 SCGB3A1Q96QR1 104 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 RSPO3Q9BXY4 272 aaPredicted RBP7.25□□□□□ -1.25
RTN3-202ENST00000339997 RPP21Q9H633 154 aaKnown RBP7.25□□□□□ -1.25
RTN3-202ENST00000339997 PLXNB1O43157 2135 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 HEATR5AQ86XA9 2040 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 VPS13CQ709C8 3753 aa7.25□□□□□ -1.25
RTN3-202ENST00000339997 TRBV6-7A0A0A0MS04 114 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 NPIPB13A6NJU9 1138 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 NPIPB5A8MRT5 1133 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 PRR33A8MZF0 331 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 NPIPB11E5RHQ5 1161 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 SAA1P0DJI8 122 aaPredicted RBP7.24□□□□□ -1.25
RTN3-202ENST00000339997 LEPP41159 167 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 TSPAN7P41732 249 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 KIR2DL4Q99706 377 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 SBF1O95248 1867 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 TRAV9-2A0A087WT02 112 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 TRAV8-2A0A0B4J237 113 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 A0A0G2JRQ6 117 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 LOC390937A0A1W2PQ73 354 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 IGHMP01871 453 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 SRD5A1P18405 259 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 FAM106AQ4KMX7 169 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 GP6Q9HCN6 339 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 ARHGAP21Q5T5U3 1957 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 SAA2-SAA4A0A096LPE2 208 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 A0A1W2PRE2 83 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 LILRA1O75019 489 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 WISP1O95388 367 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 IGHV4-39P01824 125 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 SAA2P0DJI9 122 aaPredicted RBP7.24□□□□□ -1.25
RTN3-202ENST00000339997 NPC2P61916 151 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 C1orf53Q5VUE5 145 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 IGFL4Q6B9Z1 124 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 CDPF1Q6NVV7 123 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 CFAP161Q6P656 301 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 Q6ZRM9 215 aa7.24□□□□□ -1.25
RTN3-202ENST00000339997 TEX45Q8NA69 505 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms