RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SPATA45Q537H7 98 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 ATP5EP2Q5VTU8 51 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 COLCA1Q6ZS62 124 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IL36RNQ9UBH0 155 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TNFRSF18Q9Y5U5 241 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 A0A087WV48 116 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 KIR2DL5BA0A0G2JN68 375 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 KIR2DL5BA0A0G2JPC4 375 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 LINC00271P0C7V0 271 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 CCL8P80075 99 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 PSG6Q00889 435 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 KIR2DL5AQ8N109 375 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 LYG1Q8N1E2 194 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 SDF2L1Q9HCN8 221 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV5-3A0A0A0MS03 114 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TRAV21A0A0B4J279 112 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C1QL1O75973 258 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TBX6O95947 436 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 THBDP07204 575 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 HOXB3P14651 431 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 RBM11P57052 281 aaKnown RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 RPS26P62854 115 aaKnown RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 PMP22Q01453 160 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 OR11H6Q8NGC7 330 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 DOK4Q8TEW6 326 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 HILPDAQ9Y5L2 63 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 FSHBP01225 129 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM52Q8NDY8 209 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM255BQ8WV15 326 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 RNF138Q8WVD3 245 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 NRG4Q8WWG1 115 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 LINC00477Q96M19 166 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IL36BQ9NZH7 164 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1W2PNR3 127 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1W2PQF6 199 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 FITM1A5D6W6 292 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 UBE2CO00762 179 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IGFBP3P17936 291 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 DGCR2P98153 550 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TNFRSF9Q07011 255 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 ODF1Q14990 250 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 KIRREL2Q6UWL6 708 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 USMG5Q96IX5 58 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TM2D1Q9BX74 207 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 MRPL20Q9BYC9 149 aaKnown RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IMUPQ9GZP8 106 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C15orf61A6NNL5 157 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 B4GALT1P15291 398 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 LEPP41159 167 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 HTR6P50406 440 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 RNF183Q96D59 192 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TRBV5-5A0A0J9YX44 114 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 H0YL77 283 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C1QAP02745 245 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 ANOS1P23352 680 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 CRYBB3P26998 211 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 REG1BP48304 166 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C9orf66Q5T8R8 295 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM88Q6PEY1 159 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 WDR82Q6UXN9 313 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C9orf139Q6ZV77 190 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 RPRMLQ8N4K4 120 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 ITLN2Q8WWU7 325 aaPredicted RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 WDYHV1Q96HA8 205 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 GSN-AS1Q9NRJ2 163 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 PRSS21Q9Y6M0 314 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 H0YGX0 51 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 TRACP01848 142 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 WNT2P09544 360 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 IER3P46695 156 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 SUMO2P61956 95 aaKnown RBP2.77□□□□□ -1.97
CSMD3-202ENST00000339701 UBE2BP63146 152 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 C1orf194Q5T5A4 169 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 MINOS1Q5TGZ0 78 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 VSTM2LQ96N03 204 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 MINOS1-NBL1R4GNA1 71 aa2.77□□□□□ -1.97
CSMD3-202ENST00000339701 EML5Q05BV3 1969 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 NAV2Q8IVL1 2488 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 A0A1W2PR48 441 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 JMJD7-PLA2G4BH0Y9G9 81 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 PRKNO60260 465 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 EFEMP2O95967 443 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 GPX1P07203 203 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 SSBP2P81877 361 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 WFDC3Q8IUB2 231 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TMEM252Q8N6L7 170 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 UFC1Q9Y3C8 167 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 CD5LO43866 347 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 MRPL23Q16540 153 aaKnown RBP2.76□□□□□ -1.97
CSMD3-202ENST00000339701 BPESC1Q9GZL8 116 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 ASCL3Q9NQ33 180 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 DKK4Q9UBT3 224 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 FUT9Q9Y231 359 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 GYPBP06028 91 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 TIMP3P35625 211 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 CDKN1AP38936 164 aa2.76□□□□□ -1.97
CSMD3-202ENST00000339701 GNG10P50151 68 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms