RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 OR10J1P30954 320 aa11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 SERF2P84101 59 aa11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 Q56UQ5 140 aa11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 SPSB3Q6PJ21 355 aa11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 WIPF2Q8TF74 440 aaPredicted RBP11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 MGST2Q99735 147 aa11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 MRPL36Q9P0J6 103 aaKnown RBP11.3□□□□□ -0.6
NIPAL3-202ENST00000339255 CUBNO60494 3623 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 TCRBV4S1A1TA0A5B7 111 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 RUNX1Q01196 453 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 WFDC12Q8WWY7 111 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 RSG1Q9BU20 258 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 ATRQ13535 2644 aa11.29□□□□□ -0.6
NIPAL3-202ENST00000339255 RPL29P47914 159 aaKnown RBP11.28□□□□□ -0.6
NIPAL3-202ENST00000339255 DEFA5Q01523 94 aa11.28□□□□□ -0.6
NIPAL3-202ENST00000339255 ZNF343Q6P1L6 599 aa11.28□□□□□ -0.6
NIPAL3-202ENST00000339255 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
NIPAL3-202ENST00000339255 OR2G3Q8NGZ4 309 aa11.28□□□□□ -0.6
NIPAL3-202ENST00000339255 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
NIPAL3-202ENST00000339255 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 UMAD1C9J7I0 102 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 F8W735 103 aaPredicted RBP11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 NUPL2O15504 423 aaKnown RBP11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 IGKV1-17P01599 117 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 YPEL3P61236 119 aaPredicted RBP11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 TMED6Q8WW62 240 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 SLC45A2Q9UMX9 530 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 S4R3C0 116 aa11.27□□□□□ -0.6
NIPAL3-202ENST00000339255 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 OR2T8A6NH00 312 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 CFDP00746 253 aaPredicted RBP11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 CLEC3BP05452 202 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 GPR183P32249 361 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 PROK1P58294 105 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 FOXL1Q12952 345 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 ZNF680Q8NEM1 530 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
NIPAL3-202ENST00000339255 TSPAN15O95858 294 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 MBP02144 154 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 CTSGP08311 255 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 RAB5CP51148 216 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 PRR20EP86478 221 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 PRR20CP86479 221 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 PRR20DP86480 221 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 PRR20BP86481 221 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 PRR20AP86496 221 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 KIAA0141Q14154 515 aaPredicted RBP11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 ALKAL2Q6UX46 152 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 LCNL1Q6ZST4 164 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 BPIFCQ8NFQ6 507 aa11.26□□□□□ -0.61
NIPAL3-202ENST00000339255 TGOLN2O43493 480 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 IGHV3-23P01764 117 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 LGALS1P09382 135 aaKnown RBP11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 B2MP61769 119 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 RELQ04864 619 aaPredicted RBP11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 ZNF616Q08AN1 781 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 PXDC1Q5TGL8 231 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 SLC39A9Q9NUM3 307 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 UBQLN2Q9UHD9 624 aa11.25□□□□□ -0.61
NIPAL3-202ENST00000339255 TOMM40O96008 361 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 RD3LP0DJH9 198 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 ZNF90Q03938 601 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 TIGITQ495A1 244 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 FFAR4Q5NUL3 377 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 DPPA3Q6W0C5 159 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 Q6ZRG5 221 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 C4orf3Q8WVX3 66 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 C19orf24Q9BVV8 132 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 LINC00869P0C866 280 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 ADMP35318 185 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 ARL3P36405 182 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 TCTEX1D4Q5JR98 221 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 OR51G1Q8NGK1 321 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 LRRC20Q8TCA0 184 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 CHRDL1Q9BU40 450 aa11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
NIPAL3-202ENST00000339255 HAX1O00165 279 aa11.23□□□□□ -0.61
NIPAL3-202ENST00000339255 RGS13O14921 159 aa11.23□□□□□ -0.61
NIPAL3-202ENST00000339255 OR2C1O95371 312 aa11.23□□□□□ -0.61
NIPAL3-202ENST00000339255 PSG1P11464 419 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms