RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 BTF3P20290 206 aaKnown RBP11.56□□□□□ -0.56
PCDH8-201ENST00000338862 KIR2DS2P43631 304 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 PRRX1P54821 245 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 HES1Q14469 280 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 NIT1Q86X76 327 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 DEFB124Q8NES8 71 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 FAM222BQ8WU58 562 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 YPEL2Q96QA6 119 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 LSM4Q9Y4Z0 139 aaKnown RBP11.56□□□□□ -0.56
PCDH8-201ENST00000338862 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 A0A1W2PNU3 283 aaPredicted RBP11.56□□□□□ -0.56
PCDH8-201ENST00000338862 LINC00310P59036 64 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 TNFRSF19Q9NS68 423 aa11.56□□□□□ -0.56
PCDH8-201ENST00000338862 SLC25A10Q9UBX3 287 aaPredicted RBP11.56□□□□□ -0.56
PCDH8-201ENST00000338862 NKX6-3A6NJ46 265 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 OR5AL1P0C617 328 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 AREGP15514 252 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 TSPOP30536 169 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 NHLH1Q02575 133 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 DIAPH2-AS1Q14236 149 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 WDR31Q8NA23 367 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 C18orf32Q8TCD1 76 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
PCDH8-201ENST00000338862 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 FAM87AP0C7U9 286 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 LINC00173Q6ZV60 143 aa11.55□□□□□ -0.56
PCDH8-201ENST00000338862 TECTAO75443 2155 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 ACP1P24666 158 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 SLC25A33Q9BSK2 321 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 TRAV17A0A0B4J275 112 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 A0A1B0GWJ7 208 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 IGLL1P15814 213 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 RNASE8Q8TDE3 154 aaKnown RBP11.54□□□□□ -0.56
PCDH8-201ENST00000338862 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 OSTCQ9NRP0 149 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 ATMQ13315 3056 aa11.54□□□□□ -0.56
PCDH8-201ENST00000338862 TLN1Q9Y490 2541 aaKnown RBP11.54□□□□□ -0.56
PCDH8-201ENST00000338862 FAM181BA6NEQ2 426 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 CT45A6P0DMU7 189 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 CT45A5P0DMU8 189 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 CT45A7P0DMV0 189 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 IGFBPL1Q8WX77 278 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 A0A087X0K7 114 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 UPK2O00526 184 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 SRSF12Q8WXF0 261 aaKnown RBP11.53□□□□□ -0.56
PCDH8-201ENST00000338862 CCL25O15444 150 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 SS18L1O75177 396 aaPredicted RBP11.53□□□□□ -0.56
PCDH8-201ENST00000338862 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 ADTRPQ96IZ2 230 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 LOXL4Q96JB6 756 aa11.53□□□□□ -0.56
PCDH8-201ENST00000338862 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
PCDH8-201ENST00000338862 P0C879 139 aa11.52□□□□□ -0.56
PCDH8-201ENST00000338862 SFTPCP11686 197 aa11.52□□□□□ -0.56
PCDH8-201ENST00000338862 SPACA3Q8IXA5 215 aa11.52□□□□□ -0.56
PCDH8-201ENST00000338862 CIARTQ8N365 385 aaPredicted RBP11.52□□□□□ -0.56
PCDH8-201ENST00000338862 Q8N7P7 452 aa11.52□□□□□ -0.56
PCDH8-201ENST00000338862 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.56
PCDH8-201ENST00000338862 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 DLL1O00548 723 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 CD69Q07108 199 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 VWC2Q2TAL6 325 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 EXOC3-AS1Q8N2X6 119 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 MDS2Q8NDY4 140 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 C9JCJ5 164 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 PPOXP50336 477 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 TRIP6Q15654 476 aaKnown RBP11.52□□□□□ -0.57
PCDH8-201ENST00000338862 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 HILPDAQ9Y5L2 63 aa11.52□□□□□ -0.57
PCDH8-201ENST00000338862 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.57
PCDH8-201ENST00000338862 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 PPIAL4DF5H284 164 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 Q0VG73 95 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 FBLN7Q53RD9 439 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 EBLN2Q6P2I7 272 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 SFXN3Q9BWM7 321 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 ATRXP46100 2492 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 E7EUB6 86 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 CEACAM8P31997 349 aaPredicted RBP11.51□□□□□ -0.57
PCDH8-201ENST00000338862 LOXL3P58215 753 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 SELENOTP62341 195 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 COTL1Q14019 142 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 A8MWL6 223 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 PRR33A8MZF0 331 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 NDUFB3O43676 98 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 VMA21Q3ZAQ7 101 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 ZADH2Q8N4Q0 377 aa11.51□□□□□ -0.57
PCDH8-201ENST00000338862 ZNF891A8MT65 544 aaPredicted RBP11.5□□□□□ -0.57
PCDH8-201ENST00000338862 FCER1GP30273 86 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 AMMECR1LQ6DCA0 310 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 SLC25A34Q6PIV7 304 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 NMUP48645 174 aa11.5□□□□□ -0.57
PCDH8-201ENST00000338862 HBBP68871 147 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms