RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 VKORC1L1Q8N0U8 176 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 ZNF664Q8N3J9 261 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 OR4P4Q8NGL7 312 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 OR1L4Q8NGR5 311 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 WIPF2Q8TF74 440 aaPredicted RBP8.72□□□□□ -1.01
RTN3-201ENST00000338850 SSMEM1Q8WWF3 244 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 TNFRSF14Q92956 283 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 CHRDL1Q9BU40 450 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 KAAG1Q9UBP8 84 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 CDC42EP3Q9UKI2 254 aa8.72□□□□□ -1.01
RTN3-201ENST00000338850 C17orf100A8MU93 164 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 H0YJW9 148 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 K7EN84 100 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
RTN3-201ENST00000338850 MMP23AO75900 390 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 HLA-DQA1P01909 254 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 SAA1P0DJI8 122 aaPredicted RBP8.71□□□□□ -1.02
RTN3-201ENST00000338850 ADMP35318 185 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 GNG4P50150 75 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 PPOXP50336 477 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.02
RTN3-201ENST00000338850 RPL8P62917 257 aaKnown RBP8.71□□□□□ -1.02
RTN3-201ENST00000338850 ZNF90Q03938 601 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 TIGITQ495A1 244 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 MMD2Q8IY49 270 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 STXBP6Q8NFX7 210 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 CMTM2Q8TAZ6 248 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 ZNF503Q96F45 646 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 IGF2BP2-AS1Q96M15 143 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 C20orf144Q9BQM9 153 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 SLC25A33Q9BSK2 321 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 HIVEP2P31629 2446 aa8.71□□□□□ -1.02
RTN3-201ENST00000338850 HELTA6NFD8 242 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 SMAD7O15105 426 aaKnown RBP8.7□□□□□ -1.02
RTN3-201ENST00000338850 OR4A8P0C604 315 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 MC5RP33032 325 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 BPIFB3P59826 476 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 ERVFC1-1P60608 527 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 PSG5Q15238 335 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 CENPWQ5EE01 88 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 SPATA31B1PQ5VZV4 182 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 ALKBH2Q6NS38 261 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 OR4C13Q8NGP0 309 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 ZNF430Q9H8G1 570 aaPredicted RBP8.7□□□□□ -1.02
RTN3-201ENST00000338850 NAGKQ9UJ70 344 aa8.7□□□□□ -1.02
RTN3-201ENST00000338850 IGKV1OR2-108A0A075B7D4 117 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 SMIM27A0A1W2PRY6 76 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 VSTM5A8MXK1 200 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 CRYGCP07315 174 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 SELLP14151 372 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 CRISP2P16562 243 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 COMPP49747 757 aaPredicted RBP8.69□□□□□ -1.02
RTN3-201ENST00000338850 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 CYB5R2Q6BCY4 276 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 ETFRF1Q6IPR1 90 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 TOMM20LQ6UXN7 152 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 TEX43Q6ZNM6 134 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 FAM216BQ8N7L0 139 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 OR10X1Q8NGY0 326 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 ST6GALNAC6Q969X2 333 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 HARBI1Q96MB7 349 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 MS4A10Q96PG2 267 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 CCL13Q99616 98 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 MRPL18Q9H0U6 180 aaKnown RBP8.69□□□□□ -1.02
RTN3-201ENST00000338850 TMEM106BQ9NUM4 274 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 WASHC3Q9Y3C0 194 aa8.69□□□□□ -1.02
RTN3-201ENST00000338850 TCRBV4S1A1TA0A5B7 111 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 SRRM4A7MD48 611 aaKnown RBP8.68□□□□□ -1.02
RTN3-201ENST00000338850 GGTLC3B5MD39 225 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 M0QZK8 103 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 OVOL3O00110 214 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 CORTO00230 105 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 IGLV2-8P01709 118 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 RBP4P02753 201 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 IGKV1-16P04430 117 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 CD3EP07766 207 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 LGALS7P47929 136 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 ATP5J2P56134 94 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 DLX6P56179 175 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 PLP1P60201 277 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 FLYWCH2Q96CP2 140 aaKnown RBP8.68□□□□□ -1.02
RTN3-201ENST00000338850 RBM14Q96PK6 669 aaKnown RBP8.68□□□□□ -1.02
RTN3-201ENST00000338850 MRPL20Q9BYC9 149 aaKnown RBP8.68□□□□□ -1.02
RTN3-201ENST00000338850 NGBQ9NPG2 151 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 MRPL27Q9P0M9 148 aaKnown RBP8.68□□□□□ -1.02
RTN3-201ENST00000338850 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
RTN3-201ENST00000338850 AMMECR1Q9Y4X0 333 aaPredicted RBP8.68□□□□□ -1.02
RTN3-201ENST00000338850 PPIAL4EA0A075B759 164 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 DPRXA6NFQ7 191 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 PPIAL4DF5H284 164 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 TMEM178BH3BS89 294 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 IGLV2-23P01705 113 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 AMY1AP04745 511 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 PPIAL4FP0DN26 164 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 CADP27708 2225 aa8.67□□□□□ -1.02
RTN3-201ENST00000338850 MYCNOSP40205 109 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms