RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 INSL3P51460 131 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 RAP2BP61225 183 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 DLK1P80370 383 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 STX12Q86Y82 276 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 THAP6Q8TBB0 222 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 OR5AC2Q9NZP5 309 aa11.76□□□□□ -0.53
SEC13-201ENST00000337354 ZNF320A2RRD8 509 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 LYL1P12980 280 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 OR10J1P30954 320 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 S100A11P31949 105 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 ELLP55199 621 aaPredicted RBP11.75□□□□□ -0.53
SEC13-201ENST00000337354 YPEL3P61236 119 aaPredicted RBP11.75□□□□□ -0.53
SEC13-201ENST00000337354 ZNF600Q6ZNG1 722 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 NPVFQ9HCQ7 196 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 UFC1Q9Y3C8 167 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
SEC13-201ENST00000337354 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 K7EMT4 169 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 IGKV1-17P01599 117 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 FABP1P07148 127 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 HBG1P69891 147 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 HBG2P69892 147 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 C9orf66Q5T8R8 295 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 ACOT7LQ6ZUV0 252 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 Q8WTZ3 238 aa11.74□□□□□ -0.53
SEC13-201ENST00000337354 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 ZFP92A6NM28 416 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 A8MWP6 167 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 CST7O76096 145 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 YIF1AO95070 293 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 IGLL1P15814 213 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 BAXQ07812 192 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 ATP6V1FQ16864 119 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 TMEM190Q8WZ59 177 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 TRGV9Q99603 122 aa11.73□□□□□ -0.53
SEC13-201ENST00000337354 VWFP04275 2813 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 IGSF23A1L1A6 192 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 WIPF1O43516 503 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 CCNKO75909 580 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 RD3LP0DJH9 198 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 TIGITQ495A1 244 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 TMEM217Q8N7C4 229 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 DAZ1Q9NQZ3 744 aaKnown RBP11.72□□□□□ -0.53
SEC13-201ENST00000337354 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
SEC13-201ENST00000337354 ZMAT5Q9UDW3 170 aaKnown RBP11.72□□□□□ -0.53
SEC13-201ENST00000337354 PUS1Q9Y606 427 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEC13-201ENST00000337354 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 SAP30O75446 220 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 TOMM40O96008 361 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.53
SEC13-201ENST00000337354 EWSR1Q01844 656 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC13-201ENST00000337354 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 TOMM20LQ6UXN7 152 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 OR2T35Q8NGX2 323 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 CHAC2Q8WUX2 184 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 GINS3Q9BRX5 216 aa11.71□□□□□ -0.53
SEC13-201ENST00000337354 MRPL27Q9P0M9 148 aaKnown RBP11.71□□□□□ -0.53
SEC13-201ENST00000337354 IGKV1D-37A0A075B6S9 117 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 C2orf70A6NJV1 201 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 CSN3P07498 182 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 CBLN1P23435 193 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
SEC13-201ENST00000337354 NHLH2Q02577 135 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 SAMD5Q5TGI4 173 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 TEPPQ6URK8 271 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 LILRB2Q8N423 598 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 ZNF414Q96IQ9 312 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 C20orf24Q9BUV8 137 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 UQCC1Q9NVA1 299 aa11.7□□□□□ -0.54
SEC13-201ENST00000337354 IGKV1OR2-108A0A075B7D4 117 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 TMEM213A2RRL7 107 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 PSG1P11464 419 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 FOLR2P14207 255 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
SEC13-201ENST00000337354 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 OXLD1Q5BKU9 147 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 TMEM147Q9BVK8 224 aa11.69□□□□□ -0.54
SEC13-201ENST00000337354 SELENOTP62341 195 aa11.68□□□□□ -0.54
SEC13-201ENST00000337354 ZNF90Q03938 601 aa11.68□□□□□ -0.54
SEC13-201ENST00000337354 RAB31Q13636 194 aa11.68□□□□□ -0.54
SEC13-201ENST00000337354 Q5BKY6 102 aa11.68□□□□□ -0.54
SEC13-201ENST00000337354 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
SEC13-201ENST00000337354 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
SEC13-201ENST00000337354 TECRQ9NZ01 308 aaKnown RBP11.68□□□□□ -0.54
SEC13-201ENST00000337354 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
SEC13-201ENST00000337354 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms