RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TTC9CQ8N5M4 171 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 PROCRQ9UNN8 238 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 C9JCJ5 164 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 DLL1O00548 723 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 ZFP36L1Q07352 338 aaKnown RBP10.99□□□□□ -0.65
COL2A1-201ENST00000337299 GPR82Q96P67 336 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 CSTL1Q9H114 145 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 TNFAIP6P98066 277 aaPredicted RBP10.99□□□□□ -0.65
COL2A1-201ENST00000337299 TIMM23BQ5SRD1 257 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 FAM201AQ5SY85 155 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 BCL6BQ8N143 479 aaPredicted RBP10.99□□□□□ -0.65
COL2A1-201ENST00000337299 FOXC2Q99958 501 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 SFXN3Q9BWM7 321 aa10.99□□□□□ -0.65
COL2A1-201ENST00000337299 PSG3Q16557 428 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 IL4P05112 153 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 VWC2Q2TAL6 325 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 INO80CQ6PI98 192 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-201ENST00000337299 KBTBD11-OT1A0A1B0GTJ5 212 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 CELA3AP09093 270 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 NFAM1Q8NET5 270 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-201ENST00000337299 KLF14Q8TD94 323 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-201ENST00000337299 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 ZNF71Q9NQZ8 489 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-201ENST00000337299 TSSC4Q9Y5U2 329 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-201ENST00000337299 FREM1Q5H8C1 2179 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 F5H697 171 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 PSPNO60542 156 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 MLANAQ16655 118 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 ZNF497Q6ZNH5 498 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 ZNF479Q96JC4 524 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
COL2A1-201ENST00000337299 BEX4Q9NWD9 120 aaPredicted RBP10.98□□□□□ -0.65
COL2A1-201ENST00000337299 LINC00473A8K010 186 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 HSD52Q0P140 79 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 FOXF2Q12947 444 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 LCNL1Q6ZST4 164 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 TMEM144Q7Z5S9 345 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
COL2A1-201ENST00000337299 FAM208BQ5VWN6 2430 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 IGLC7A0M8Q6 106 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 BVES-AS1Q5T3Y7 98 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 OR52E5Q8NH55 327 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 NCOR1P1Q9H4R4 102 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 LOC102723996A0A087X1L8 192 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 CGB1A6NKQ9 187 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 ZNF146Q15072 292 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 PRSS57Q6UWY2 283 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 Q8NFD4 153 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 ANAPC13Q9BS18 74 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
COL2A1-201ENST00000337299 TP73-AS1Q9UF72 201 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 A0A0C4DFX4 3053 aa10.97□□□□□ -0.65
COL2A1-201ENST00000337299 NDUFB3O43676 98 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 PCOLCEQ15113 449 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 ETDBQ3ZM63 59 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 ACACBO00763 2458 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 CELA3BP08861 270 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 RBX1P62877 108 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 ATP1A1-AS1Q5TC04 95 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 SARAFQ96BY9 339 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 ASCL2Q99929 193 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
COL2A1-201ENST00000337299 IGHV1-45A0A0A0MS14 117 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 M0R3E3 92 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 CFHR1Q03591 330 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 RSPO1Q2MKA7 263 aaPredicted RBP10.96□□□□□ -0.66
COL2A1-201ENST00000337299 SLC25A53Q5H9E4 307 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 KIR3DL3Q8N743 410 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 V9GYV3 84 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 PLXNB3Q9ULL4 1909 aa10.96□□□□□ -0.66
COL2A1-201ENST00000337299 AREGP15514 252 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 AZU1P20160 251 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 PTGDSP41222 190 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 C19orf24Q9BVV8 132 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 S4R3C0 116 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 OR11H12B2RN74 326 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 PLXNB1O43157 2135 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 OR11H1Q8NG94 326 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 OR11H2Q8NH07 326 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 TRAV8-1A0A0A6YYK1 113 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 MGPP08493 103 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
COL2A1-201ENST00000337299 SPANXN1Q5VSR9 72 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 SPACA3Q8IXA5 215 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 OR4X2Q8NGF9 303 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 SOX21Q9Y651 276 aaPredicted RBP10.95□□□□□ -0.66
COL2A1-201ENST00000337299 K7EN84 100 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 DUTP33316 252 aaKnown RBP10.95□□□□□ -0.66
COL2A1-201ENST00000337299 TMEM42Q69YG0 159 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 RAB1CQ92928 201 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 JPT1Q9UK76 154 aa10.95□□□□□ -0.66
COL2A1-201ENST00000337299 TNCP24821 2201 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 FTH1P19P0C7X4 201 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 CCL8P80075 99 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 FADS6Q8N9I5 356 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms