RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 NPBWR1P48145 328 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 BAXQ07812 192 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 Q56UQ5 140 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 FAM209BQ5JX69 171 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 STX12Q86Y82 276 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 GGACTQ9BVM4 153 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 ZC4H2Q9NQZ6 224 aa13.44□□□□□ -0.26
CHGA-202ENST00000334654 CCL24O00175 119 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 IGLC1P0CG04 106 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 S100A11P31949 105 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 ARL3P36405 182 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 VWC2Q2TAL6 325 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 SLC35E1Q96K37 410 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 MFFQ9GZY8 342 aa13.43□□□□□ -0.26
CHGA-202ENST00000334654 LINC01619G3V211 115 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 GNG7O60262 68 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
CHGA-202ENST00000334654 ZNF616Q08AN1 781 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 SPSB3Q6PJ21 355 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 TREML4Q6UXN2 200 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 TMEM144Q7Z5S9 345 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 THAP8Q8NA92 274 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 OR5C1Q8NGR4 320 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 GGCTO75223 188 aaKnown RBP13.42□□□□□ -0.26
CHGA-202ENST00000334654 OR2C1O95371 312 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 MYCNOSP40205 109 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 HBG1P69891 147 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 HBG2P69892 147 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 WFDC1Q9HC57 220 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 NPVFQ9HCQ7 196 aa13.42□□□□□ -0.26
CHGA-202ENST00000334654 GAR1Q9NY12 217 aaKnown RBP13.42□□□□□ -0.26
CHGA-202ENST00000334654 PKD1L1Q8TDX9 2849 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 ARPC5O15511 151 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 TSPAN15O95858 294 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 OR10J1P30954 320 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 HOXD3P31249 432 aaPredicted RBP13.41□□□□□ -0.26
CHGA-202ENST00000334654 SLURP1P55000 103 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 KLF5Q13887 457 aaPredicted RBP13.41□□□□□ -0.26
CHGA-202ENST00000334654 ATP6V1FQ16864 119 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 TIGITQ495A1 244 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 KCNRGQ8N5I3 272 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 OR1S2Q8NGQ3 325 aa13.41□□□□□ -0.26
CHGA-202ENST00000334654 LSM4Q9Y4Z0 139 aaKnown RBP13.41□□□□□ -0.26
CHGA-202ENST00000334654 TRAV30A0A087WSZ9 112 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 IGHV3-35A0A0C4DH35 117 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 RGS13O14921 159 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 OR4F17Q8NGA8 305 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 DPF1Q92782 380 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 OR4F4Q96R69 305 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 TMEM147Q9BVK8 224 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 UQCC1Q9NVA1 299 aa13.4□□□□□ -0.26
CHGA-202ENST00000334654 SMCO3A2RU48 225 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 TAAR5O14804 337 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 NUPL2O15504 423 aaKnown RBP13.39□□□□□ -0.27
CHGA-202ENST00000334654 CXCL2P19875 107 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 YPEL3P61236 119 aaPredicted RBP13.39□□□□□ -0.27
CHGA-202ENST00000334654 AKR1C1Q04828 323 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 CLINT1Q14677 625 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 GPHB5Q86YW7 130 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 DLX4Q92988 240 aaPredicted RBP13.39□□□□□ -0.27
CHGA-202ENST00000334654 TRGV9Q99603 122 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 SMIM3Q9BZL3 60 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 FBXL17Q9UF56 701 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
CHGA-202ENST00000334654 ZP3P21754 424 aa13.38□□□□□ -0.27
CHGA-202ENST00000334654 ZNF90Q03938 601 aa13.38□□□□□ -0.27
CHGA-202ENST00000334654 OPCMLQ14982 345 aa13.38□□□□□ -0.27
CHGA-202ENST00000334654 RPEL1Q2QD12 228 aa13.38□□□□□ -0.27
CHGA-202ENST00000334654 TMEM182Q6ZP80 229 aaPredicted RBP13.38□□□□□ -0.27
CHGA-202ENST00000334654 LINC00482Q8N8I6 264 aa13.38□□□□□ -0.27
CHGA-202ENST00000334654 ZFP92A6NM28 416 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 M0QZ24 198 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 AP2S1P53680 142 aaPredicted RBP13.37□□□□□ -0.27
CHGA-202ENST00000334654 TEPPQ6URK8 271 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 UNQ9165/PRO28630Q6UXU0 137 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 ZNF767PQ75MW2 155 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 RCC1LQ96I51 464 aaKnown RBP13.37□□□□□ -0.27
CHGA-202ENST00000334654 ATP5SQ99766 215 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 ARL6Q9H0F7 186 aa13.37□□□□□ -0.27
CHGA-202ENST00000334654 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 NDUFA4O00483 81 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 SLC51BQ86UW2 128 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 MGST2Q99735 147 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 ZFAND3Q9H8U3 227 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 BOLA1Q9Y3E2 137 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 KANTRA0A1W2PQU2 76 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 LGALS9O00182 355 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 TOMM40O96008 361 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 PF4P02776 101 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 PSG1P11464 419 aa13.36□□□□□ -0.27
CHGA-202ENST00000334654 GATA2P23769 480 aaPredicted RBP13.36□□□□□ -0.27
CHGA-202ENST00000334654 SYNJ2BPP57105 145 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms