RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 DKK4Q9UBT3 224 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 TP73-AS1Q9UF72 201 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 SPCS1Q9Y6A9 102 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 PCNX2A6NKB5 2137 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 GTF3C1Q12789 2109 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 A0A1W2PPM0 123 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 RRHO14718 337 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 EDDM3BP56851 147 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 GCSAMLQ5JQS6 135 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 KIR3DL3Q8N743 410 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 H1FXQ92522 213 aaKnown RBP16.82■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L4A6NDZ8 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L3A6NE82 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L5A6NJ08 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 H3BUT2 72 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 FCGR3BO75015 233 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 PROP1O75360 226 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 LEPROTL1O95214 131 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 ERVK-16P61578 105 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 PRAMEF5Q5TYX0 476 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 OR4A16Q8NH70 328 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 OR4A5Q8NH83 315 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L2Q8NHZ7 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MAP1LC3CQ9BXW4 147 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 RAB9BQ9NP90 201 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF207O43670 478 aaKnown RBP16.8■□□□□ 0.28
SPNS1-203ENST00000334536 LIPFP07098 398 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 LINC00205P59089 165 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 C3orf36Q3SXR2 165 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 IGHV3-13P01766 116 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 SPINK9Q5DT21 86 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF841Q6ZN19 808 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 FAM231DQ6ZW35 169 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 RNASE7Q9H1E1 156 aaKnown RBP16.8■□□□□ 0.28
SPNS1-203ENST00000334536 SLC25A10Q9UBX3 287 aaPredicted RBP16.8■□□□□ 0.28
SPNS1-203ENST00000334536 USF3Q68DE3 2245 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 CACNA1GO43497 2377 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 WT1P19544 449 aaPredicted RBP16.79■□□□□ 0.28
SPNS1-203ENST00000334536 TCL1AP56279 114 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 TMPRSS3P57727 454 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 RPS16P62249 146 aaKnown RBP16.79■□□□□ 0.28
SPNS1-203ENST00000334536 LTC4SQ16873 150 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 THYN1Q9P016 225 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 SIVA1O15304 175 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 CEACAM4O75871 244 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 FABP2P12104 132 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 VDAC2P45880 294 aaPredicted RBP16.79■□□□□ 0.28
SPNS1-203ENST00000334536 LOXL3P58215 753 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 IGF2-ASQ6U949 168 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 PQLC2Q6ZP29 291 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 GCSAMQ8N6F7 178 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 TMEM167BQ9NRX6 74 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 DUSP13Q9UII6 198 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 HSPB8Q9UJY1 196 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.78■□□□□ 0.28
SPNS1-203ENST00000334536 APOA2P02652 100 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 SLC35B1P78383 322 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 LINC01545Q5VT33 79 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 DEFB124Q8NES8 71 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 S1PR3Q99500 378 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 GGTLC1Q9BX51 225 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF257Q9Y2Q1 563 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 PTPRBP23467 1997 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 FREM2Q5SZK8 3169 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 IGHV1-24A0A0C4DH33 117 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 TEX48A0A1B0GUV7 120 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 MSMPQ1L6U9 139 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 TIMM23BQ5SRD1 257 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 CCDC144NLQ6NUI1 221 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 DOLPP1Q86YN1 238 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 NHLRC2Q8NBF2 726 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.77■□□□□ 0.28
SPNS1-203ENST00000334536 OR9G4Q8NGQ1 327 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 IFI27L2Q9H2X8 130 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 LHBP01229 141 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 CGB3P0DN86 165 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 CGB7P0DN87 165 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 PPOXP50336 477 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 KIR3DS1Q14943 382 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 SEM1Q6ZVN7 128 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 ZADH2Q8N4Q0 377 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 URB1-AS1Q96HZ7 61 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 COL25A1Q9BXS0 654 aaPredicted RBP16.77■□□□□ 0.27
SPNS1-203ENST00000334536 HEYLQ9NQ87 328 aaPredicted RBP16.77■□□□□ 0.27
SPNS1-203ENST00000334536 OR11H12B2RN74 326 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 TSPAN13O95857 204 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 GLRXP35754 106 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 RPL8P62917 257 aaKnown RBP16.76■□□□□ 0.27
SPNS1-203ENST00000334536 RPL24P83731 157 aaKnown RBP16.76■□□□□ 0.27
SPNS1-203ENST00000334536 FXYD3Q14802 87 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 RTL8BQ17RB0 113 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 DEFB109BQ30KR1 87 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 OR11H1Q8NG94 326 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 OR11H2Q8NH07 326 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 Q8TCH9 128 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 CALYQ9NYX4 217 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 TRGV8A0A0C4DH27 118 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 K7EQM0 130 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 DDB2Q92466 427 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 IGF2BP2-AS1Q96M15 143 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms