RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 DKK4Q9UBT3 224 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 TP73-AS1Q9UF72 201 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 SPCS1Q9Y6A9 102 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 PCNX2A6NKB5 2137 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 GTF3C1Q12789 2109 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 A0A1W2PPM0 123 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 RRHO14718 337 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 EDDM3BP56851 147 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 GCSAMLQ5JQS6 135 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 KIR3DL3Q8N743 410 aa16.82■□□□□ 0.28
SPNS1-203ENST00000334536 H1FXQ92522 213 aaKnown RBP16.82■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L4A6NDZ8 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L3A6NE82 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L5A6NJ08 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 H3BUT2 72 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 FCGR3BO75015 233 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 PROP1O75360 226 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 LEPROTL1O95214 131 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 ERVK-16P61578 105 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 PRAMEF5Q5TYX0 476 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 OR4A16Q8NH70 328 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 OR4A5Q8NH83 315 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MBD3L2Q8NHZ7 208 aaPredicted RBP16.81■□□□□ 0.28
SPNS1-203ENST00000334536 MAP1LC3CQ9BXW4 147 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 RAB9BQ9NP90 201 aa16.81■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF207O43670 478 aaKnown RBP16.8■□□□□ 0.28
SPNS1-203ENST00000334536 LIPFP07098 398 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 LINC00205P59089 165 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 C3orf36Q3SXR2 165 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 IGHV3-13P01766 116 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 SPINK9Q5DT21 86 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF841Q6ZN19 808 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 FAM231DQ6ZW35 169 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 RNASE7Q9H1E1 156 aaKnown RBP16.8■□□□□ 0.28
SPNS1-203ENST00000334536 SLC25A10Q9UBX3 287 aaPredicted RBP16.8■□□□□ 0.28
SPNS1-203ENST00000334536 USF3Q68DE3 2245 aa16.8■□□□□ 0.28
SPNS1-203ENST00000334536 CACNA1GO43497 2377 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 WT1P19544 449 aaPredicted RBP16.79■□□□□ 0.28
SPNS1-203ENST00000334536 TCL1AP56279 114 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 TMPRSS3P57727 454 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 RPS16P62249 146 aaKnown RBP16.79■□□□□ 0.28
SPNS1-203ENST00000334536 LTC4SQ16873 150 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 THYN1Q9P016 225 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 SIVA1O15304 175 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 CEACAM4O75871 244 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 FABP2P12104 132 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 VDAC2P45880 294 aaPredicted RBP16.79■□□□□ 0.28
SPNS1-203ENST00000334536 LOXL3P58215 753 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 IGF2-ASQ6U949 168 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 PQLC2Q6ZP29 291 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 GCSAMQ8N6F7 178 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 TMEM167BQ9NRX6 74 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 DUSP13Q9UII6 198 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 HSPB8Q9UJY1 196 aa16.79■□□□□ 0.28
SPNS1-203ENST00000334536 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.78■□□□□ 0.28
SPNS1-203ENST00000334536 APOA2P02652 100 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 SLC35B1P78383 322 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 LINC01545Q5VT33 79 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 DEFB124Q8NES8 71 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 S1PR3Q99500 378 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 GGTLC1Q9BX51 225 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF257Q9Y2Q1 563 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 PTPRBP23467 1997 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 FREM2Q5SZK8 3169 aa16.78■□□□□ 0.28
SPNS1-203ENST00000334536 IGHV1-24A0A0C4DH33 117 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 TEX48A0A1B0GUV7 120 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 MSMPQ1L6U9 139 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 TIMM23BQ5SRD1 257 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 CCDC144NLQ6NUI1 221 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 DOLPP1Q86YN1 238 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 NHLRC2Q8NBF2 726 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.77■□□□□ 0.28
SPNS1-203ENST00000334536 OR9G4Q8NGQ1 327 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 IFI27L2Q9H2X8 130 aa16.77■□□□□ 0.28
SPNS1-203ENST00000334536 LHBP01229 141 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 CGB3P0DN86 165 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 CGB7P0DN87 165 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 PPOXP50336 477 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 KIR3DS1Q14943 382 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 SEM1Q6ZVN7 128 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 ZADH2Q8N4Q0 377 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 URB1-AS1Q96HZ7 61 aa16.77■□□□□ 0.27
SPNS1-203ENST00000334536 COL25A1Q9BXS0 654 aaPredicted RBP16.77■□□□□ 0.27
SPNS1-203ENST00000334536 HEYLQ9NQ87 328 aaPredicted RBP16.77■□□□□ 0.27
SPNS1-203ENST00000334536 OR11H12B2RN74 326 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 TSPAN13O95857 204 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 GLRXP35754 106 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 RPL8P62917 257 aaKnown RBP16.76■□□□□ 0.27
SPNS1-203ENST00000334536 RPL24P83731 157 aaKnown RBP16.76■□□□□ 0.27
SPNS1-203ENST00000334536 FXYD3Q14802 87 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 RTL8BQ17RB0 113 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 DEFB109BQ30KR1 87 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 OR11H1Q8NG94 326 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 OR11H2Q8NH07 326 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 Q8TCH9 128 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 CALYQ9NYX4 217 aa16.76■□□□□ 0.27
SPNS1-203ENST00000334536 TRGV8A0A0C4DH27 118 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 K7EQM0 130 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 DDB2Q92466 427 aa16.75■□□□□ 0.27
SPNS1-203ENST00000334536 IGF2BP2-AS1Q96M15 143 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms