RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FAM90A26D6RGX4 464 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 CLN5O75503 358 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 CST7O76096 145 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 NDUFA7O95182 113 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 IGLV1-40P01703 118 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 IGHV3-11P01762 117 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 AKR1C1Q04828 323 aa12.85□□□□□ -0.35
SHOX-201ENST00000334060 KIAA0141Q14154 515 aaPredicted RBP12.85□□□□□ -0.35
SHOX-201ENST00000334060 NPIPB5A8MRT5 1133 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 PF4V1P10720 104 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 HOXA5P20719 270 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 NHLH2Q02577 135 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 CENPVQ7Z7K6 275 aaPredicted RBP12.84□□□□□ -0.35
SHOX-201ENST00000334060 OR5AU1Q8NGC0 362 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 TMED6Q8WW62 240 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 GGACTQ9BVM4 153 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
SHOX-201ENST00000334060 IGLV11-55A0A075B6I3 123 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 PRSS46E5RG02 174 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 TRBV12-3P01733 135 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 OR8U8P0C7N1 319 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 NPY1RP25929 384 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 PSMB8P28062 276 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 CDX1P47902 265 aaPredicted RBP12.83□□□□□ -0.35
SHOX-201ENST00000334060 ZNF124Q15973 351 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 OR8G2PQ6IF36 304 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 SLC25A24Q6NUK1 477 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 ENY2Q9NPA8 101 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.35
SHOX-201ENST00000334060 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.36
SHOX-201ENST00000334060 TGOLN2O43493 480 aa12.83□□□□□ -0.36
SHOX-201ENST00000334060 JTBO76095 146 aa12.83□□□□□ -0.36
SHOX-201ENST00000334060 DEFA4P12838 97 aa12.83□□□□□ -0.36
SHOX-201ENST00000334060 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
SHOX-201ENST00000334060 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
SHOX-201ENST00000334060 INS-IGF2F8WCM5 200 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 K7EIM0 57 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 IGHG4P01861 327 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
SHOX-201ENST00000334060 SNCAP37840 140 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 RPL15P61313 204 aaKnown RBP12.82□□□□□ -0.36
SHOX-201ENST00000334060 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
SHOX-201ENST00000334060 RHOGP84095 191 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 SRSF3P84103 164 aaKnown RBP12.82□□□□□ -0.36
SHOX-201ENST00000334060 AWAT1Q58HT5 328 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 TMEM14EPQ6UXP3 125 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 TMEM252Q8N6L7 170 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 DUX3Q96PT4 197 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 MDFIQ99750 246 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 HIPK2Q9H2X6 1198 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 HRH4Q9H3N8 390 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
SHOX-201ENST00000334060 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 F8W735 103 aaPredicted RBP12.81□□□□□ -0.36
SHOX-201ENST00000334060 TRGV3P03979 118 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 RAB9AP51151 201 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 TPPP2P59282 170 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 OR4F5Q8NH21 305 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 PBDC1Q9BVG4 233 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 LYRM2Q9NU23 88 aaPredicted RBP12.81□□□□□ -0.36
SHOX-201ENST00000334060 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 C7orf77A4D0Y5 90 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 SEC14L6B5MCN3 397 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 MT-CO2P00403 227 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 VAMP2P63027 116 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 DEFB136Q30KP8 78 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 C2orf83Q53S99 150 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 OR1P1Q8NH06 330 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 CITED2Q99967 270 aaPredicted RBP12.81□□□□□ -0.36
SHOX-201ENST00000334060 SMIM3Q9BZL3 60 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 FBXL7Q9UJT9 491 aa12.81□□□□□ -0.36
SHOX-201ENST00000334060 I3L2K1 104 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 MED6O75586 246 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 TAS2R60P59551 318 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 C15orf32Q32M92 178 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 PVRIGQ6DKI7 326 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 CCDC140Q96MF4 163 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 RAB40CQ96S21 281 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
SHOX-201ENST00000334060 RFNGQ9Y644 331 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 PKIAP61925 76 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 EWSR1Q01844 656 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHOX-201ENST00000334060 ETV3LQ6ZN32 361 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 ZNF414Q96IQ9 312 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
SHOX-201ENST00000334060 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
SHOX-201ENST00000334060 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
SHOX-201ENST00000334060 DNHD1Q96M86 4753 aa12.79□□□□□ -0.36
SHOX-201ENST00000334060 IGHV3-35A0A0C4DH35 117 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 E5RGE8 158 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 TSTD3H0UI37 97 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 OPRK1P41145 380 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 KHDC1LQ5JSQ8 128 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms