RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RPH3ALQ9UNE2 315 aa9.95□□□□□ -0.82
VPS33B-201ENST00000333371 A0A0G2JNJ9 132 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 SMIM27A0A1W2PRY6 76 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 COX7A2P2O60397 106 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 MOSP00540 346 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 AMY1AP04745 511 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 USF1P22415 310 aaPredicted RBP9.94□□□□□ -0.82
VPS33B-201ENST00000333371 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 WFDC8Q8IUA0 241 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 Q9UFV3 132 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 AMMECR1Q9Y4X0 333 aaPredicted RBP9.94□□□□□ -0.82
VPS33B-201ENST00000333371 CEP295Q9C0D2 2601 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 TRBV9A0A0B4J1U6 114 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 A0A1W2PN81 502 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 DLL1O00548 723 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 TBR1Q16650 682 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF841Q6ZN19 808 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 NIT1Q86X76 327 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 BLNKQ8WV28 456 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 FLYWCH2Q96CP2 140 aaKnown RBP9.94□□□□□ -0.82
VPS33B-201ENST00000333371 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF430Q9H8G1 570 aaPredicted RBP9.94□□□□□ -0.82
VPS33B-201ENST00000333371 LINC00574Q9H8X3 128 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF586Q9NXT0 402 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 ABCA4P78363 2273 aa9.94□□□□□ -0.82
VPS33B-201ENST00000333371 C16orf97H3BN30 126 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 APOA2P02652 100 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 TNFSF4P23510 183 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 CD24P25063 80 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 ERHP84090 104 aaKnown RBP9.93□□□□□ -0.82
VPS33B-201ENST00000333371 LCN12Q6JVE5 192 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 HCP5Q6MZN7 132 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 TMEM108Q6UXF1 575 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 TMEM68Q96MH6 324 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 PAXXQ9BUH6 204 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 ARL2-SNX15V9GYD0 113 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 ARHGAP32A7KAX9 2087 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 SLC25A17O43808 307 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 APCSP02743 223 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 MFAP2P55001 183 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 RELQ04864 619 aaPredicted RBP9.93□□□□□ -0.82
VPS33B-201ENST00000333371 C10orf113Q5VZT2 155 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 WDR73Q6P4I2 378 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF329Q86UD4 541 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 Q8NA96 180 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 CCL17Q92583 94 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF714Q96N38 554 aa9.93□□□□□ -0.82
VPS33B-201ENST00000333371 VWC2LB2RUY7 222 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF324O75467 553 aaPredicted RBP9.92□□□□□ -0.82
VPS33B-201ENST00000333371 MT-ND6P03923 174 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 NPSP0C0P6 89 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 ORM2P19652 201 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 CAMPP49913 170 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 SPATA45Q537H7 98 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 TEX36Q5VZQ5 186 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
VPS33B-201ENST00000333371 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 TMEM208Q9BTX3 173 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 SAP30LQ9HAJ7 183 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 NBASA2RRP1 2371 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 IZUMO1RA6ND01 250 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 RPLP1P05386 114 aaKnown RBP9.92□□□□□ -0.82
VPS33B-201ENST00000333371 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 OR5AN1Q8NGI8 311 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 C18orf32Q8TCD1 76 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 GSX1Q9H4S2 264 aaPredicted RBP9.92□□□□□ -0.82
VPS33B-201ENST00000333371 PEX7O00628 323 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 MMDQ15546 238 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 ADIPOQQ15848 244 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 OR10J3Q5JRS4 329 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 LEMD1Q68G75 181 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 LINC00305Q7Z4B0 112 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 FXYD5Q96DB9 178 aa9.92□□□□□ -0.82
VPS33B-201ENST00000333371 ZNF331Q9NQX6 463 aaPredicted RBP9.92□□□□□ -0.82
VPS33B-201ENST00000333371 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 C22orf46C9J442 243 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 K7ENP7 123 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 FSTL3O95633 263 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 IGLV2-23P01705 113 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 HLA-DQA1P01909 254 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 Q71RC1 249 aaPredicted RBP9.91□□□□□ -0.82
VPS33B-201ENST00000333371 PNKDQ8N490 385 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 MRPL32Q9BYC8 188 aaKnown RBP9.91□□□□□ -0.82
VPS33B-201ENST00000333371 GAL3ST2Q9H3Q3 398 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 LPAR2Q9HBW0 351 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 ASH1LQ9NR48 2969 aaKnown RBP9.91□□□□□ -0.82
VPS33B-201ENST00000333371 PTPRQQ9UMZ3 2332 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 DPRXA6NFQ7 191 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 NKX6-3A6NJ46 265 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 ENSAO43768 121 aaKnown RBP9.91□□□□□ -0.82
VPS33B-201ENST00000333371 CNTFRP26992 372 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 TNXAQ16473 311 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms